BLASTX 7.6.2
Query= RU44979 /QuerySize=223
(222 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G11500.1 | Symbols: | small nuclear ribonucle... 87 2e-018
TAIR9_protein||AT2G23930.1 | Symbols: SNRNP-G | SNRNP-G (PROBABL... 85 7e-018
TAIR9_protein||AT2G23930.2 | Symbols: SNRNP-G | SNRNP-G (PROBABL... 58 9e-010
>TAIR9_protein||AT3G11500.1 | Symbols: | small nuclear ribonucleoprotein G,
putative / snRNP-G, putative / Sm protein G, putative |
chr3:3621626-3622474 REVERSE
Length = 80
Score = 87 bits (213), Expect = 2e-018
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 97 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLV 222
MSRSGQPPDLKKYMDKKLQIKLNANRM++GTLRGFDQFMNLV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLV 42
>TAIR9_protein||AT2G23930.1 | Symbols: SNRNP-G | SNRNP-G (PROBABLE SMALL NUCLEAR
RIBONUCLEOPROTEIN G) | chr2:10182353-10183026 FORWARD
Length = 81
Score = 85 bits (209), Expect = 7e-018
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +1
Query: 97 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLV 222
MSRSGQPPDLKKYMDKKLQIKLNANRM+ GTLRGFDQFMNLV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLV 42
>TAIR9_protein||AT2G23930.2 | Symbols: SNRNP-G | SNRNP-G (PROBABLE SMALL NUCLEAR
RIBONUCLEOPROTEIN G) | chr2:10182496-10183026 FORWARD
Length = 68
Score = 58 bits (139), Expect = 9e-010
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 136 MDKKLQIKLNANRMIIGTLRGFDQFMNLV 222
MDKKLQIKLNANRM+ GTLRGFDQFMNLV
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLV 29
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
|