BLASTX 7.6.2
Query= RU44996 /QuerySize=411
(410 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G68030.1 | Symbols: | PHD finger protein-rela... 65 1e-011
TAIR9_protein||AT1G14770.1 | Symbols: | protein binding / zinc ... 54 2e-008
TAIR9_protein||AT1G14770.2 | Symbols: | protein binding / zinc ... 54 2e-008
TAIR9_protein||AT5G63700.1 | Symbols: | zinc finger (C3HC4 type... 51 2e-007
>TAIR9_protein||AT1G68030.1 | Symbols: | PHD finger protein-related |
chr1:25500378-25501544 REVERSE
Length = 315
Score = 65 bits (157), Expect = 1e-011
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 68 CLMCNEGGQLLICSTSDCPLAYHESCMGSKFISYKTGDFYCPFCAYDLDLTEYLEAEKEA 247
C+ C E G+LL CS+ C + H+ C+ S + GDFYC CA EY++ + E
Sbjct: 229 CVNCKESGKLLFCSSDGCEVMVHQKCLDSPPSYHDAGDFYCSLCALTCPSAEYVQFQDEV 288
Query: 248 SRLKKDLWAFLCLLGSSS*RK 310
++ K+ L +FL L+ + +K
Sbjct: 289 AKAKRKLVSFLRLMSEVNKKK 309
>TAIR9_protein||AT1G14770.1 | Symbols: | protein binding / zinc ion binding |
chr1:5086867-5088437 REVERSE
Length = 430
Score = 54 bits (129), Expect = 2e-008
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +2
Query: 50 SKEKDHCLMCNEGGQLLICSTSDCPLAYHESCMGSKFISYKTGDFYCPFCAYDLDLTEYL 229
++ ++ C C + G LLICS S+C H+ C+ + G+F CP C YD EY
Sbjct: 342 TRPENVCWKCEKEGTLLICSRSECAAKVHKECLNCPVNVDEYGNFLCPLCWYDRLAMEYH 401
Query: 230 EAEKEASRLKKDL 268
E++K S K+ L
Sbjct: 402 ESQKLISCAKRRL 414
>TAIR9_protein||AT1G14770.2 | Symbols: | protein binding / zinc ion binding |
chr1:5086867-5088437 REVERSE
Length = 430
Score = 54 bits (129), Expect = 2e-008
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +2
Query: 50 SKEKDHCLMCNEGGQLLICSTSDCPLAYHESCMGSKFISYKTGDFYCPFCAYDLDLTEYL 229
++ ++ C C + G LLICS S+C H+ C+ + G+F CP C YD EY
Sbjct: 342 TRPENVCWKCEKEGTLLICSRSECAAKVHKECLNCPVNVDEYGNFLCPLCWYDRLAMEYH 401
Query: 230 EAEKEASRLKKDL 268
E++K S K+ L
Sbjct: 402 ESQKLISCAKRRL 414
>TAIR9_protein||AT5G63700.1 | Symbols: | zinc finger (C3HC4 type RING finger)
family protein | chr5:25493934-25497632 REVERSE
Length = 572
Score = 51 bits (121), Expect = 2e-007
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 59 KDHCLMCNEGGQLLICSTSDCPLAYHESCMGSKFISYKTGDFY 187
+D C +C +GG L++C DCP YHESC+ + K GD Y
Sbjct: 22 EDWCFICKDGGNLMLCDFKDCPKVYHESCVEKDSSASKNGDSY 64
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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