BLASTX 7.6.2
Query= RU45059 /QuerySize=839
(838 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G57150.1 | Symbols: NAP57, AtNAP57, CBF5, AtCB... 376 2e-104
TAIR9_protein||AT5G14460.1 | Symbols: | pseudouridine synthase/... 62 3e-010
>TAIR9_protein||AT3G57150.1 | Symbols: NAP57, AtNAP57, CBF5, AtCBF5 | NAP57
(Arabidopsis thaliana homologue of NAP57); pseudouridine synthase |
chr3:21154255-21155952 REVERSE
Length = 566
Score = 376 bits (963), Expect = 2e-104
Identities = 179/196 (91%), Positives = 191/196 (97%)
Frame = +2
Query: 212 DYMIKPQSSTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVLNL 391
DYMIKPQS TP++DTSQWPILLKNYDRLNVRTGHYTP+ +G+SPLKRPL EYIRYGV+NL
Sbjct: 26 DYMIKPQSFTPAIDTSQWPILLKNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYGVINL 85
Query: 392 DKPANPSSHE..AWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 571
DKPANPSSHE AWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV
Sbjct: 86 DKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYV 145
Query: 572 CVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQLKIRTIYESKLLEYDAEKHLV 751
CVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQL+IRTIYESKLLEYDA++HLV
Sbjct: 146 CVARLHSAVPDVAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLV 205
Query: 752 VFWISCEAGTYVRTLC 799
VFW+SCEAGTY+RT+C
Sbjct: 206 VFWVSCEAGTYIRTMC 221
>TAIR9_protein||AT5G14460.1 | Symbols: | pseudouridine synthase/ transporter |
chr5:4660239-4662543 REVERSE
Length = 541
Score = 62 bits (150), Expect = 3e-010
Identities = 32/72 (44%), Positives = 46/72 (63%)
Frame = +2
Query: 380 VLNLDKPANPSSHE..AWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAG 559
VL ++KP +S ++R+++V+K GH+GTLDP TG LIVC+ +AT++V QG
Sbjct: 323 VLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMI 382
Query: 560 KEYVCVARLHSA 595
K Y V RL A
Sbjct: 383 KGYSGVFRLGEA 394
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
|