BLASTX 7.6.2
Query= RU45070 /QuerySize=412
(411 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA... 148 1e-036
TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA... 148 2e-036
TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding... 132 6e-032
TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A);... 132 8e-032
TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding... 131 2e-031
TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTA... 131 2e-031
TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |... 131 2e-031
TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7... 118 1e-027
TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding... 117 4e-027
TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 80 4e-016
TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 80 4e-016
TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8... 80 4e-016
TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding... 76 5e-015
>TAIR9_protein||AT1G08880.1 | Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | H2AXA;
DNA binding | chr1:2847144-2847676 REVERSE
Length = 143
Score = 148 bits (372), Expect = 1e-036
Identities = 75/105 (71%), Positives = 80/105 (76%)
Frame = +3
Query: 96 GPGKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXX 275
G GKPKATKSVSRSSKAGLQFPVGR+ARFLK G+YA+RVG G+P
Sbjct: 13 GRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAAEVLE 72
Query: 276 XXGNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK RI PRHIQLAVRNDEE +KLLGSVTIANGGVLP
Sbjct: 73 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLP 117
>TAIR9_protein||AT1G54690.1 | Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX |
GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding |
chr1:20414607-20415206 REVERSE
Length = 143
Score = 148 bits (371), Expect = 2e-036
Identities = 75/105 (71%), Positives = 80/105 (76%)
Frame = +3
Query: 96 GPGKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXX 275
G GKPKATKSVSRSSKAGLQFPVGR+ARFLK G+YA+RVG G+P
Sbjct: 13 GRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLE 72
Query: 276 XXGNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK RI PRHIQLAVRNDEE +KLLGSVTIANGGVLP
Sbjct: 73 LAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLP 117
>TAIR9_protein||AT1G51060.1 | Symbols: HTA10 | HTA10; DNA binding |
chr1:18926948-18927443 FORWARD
Length = 133
Score = 132 bits (332), Expect = 6e-032
Identities = 66/103 (64%), Positives = 74/103 (71%)
Frame = +3
Query: 102 GKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXXX 281
G A K+ +RSSKAGLQFPVGR+ARFLKKG+YA+RVG G+P
Sbjct: 9 GSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAAEVLELA 68
Query: 282 GNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK RI PRHIQLAVRNDEE +KLLG VTIANGGV+P
Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMP 111
>TAIR9_protein||AT4G27230.1 | Symbols: HTA2 | HTA2 (histone H2A); DNA binding |
chr4:13637515-13638325 REVERSE
Length = 132
Score = 132 bits (331), Expect = 8e-032
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = +3
Query: 102 GKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXXX 281
G A KS SRSSKAGLQFPVGR+ARFLK G+YA+RVG G+P
Sbjct: 9 GSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELA 68
Query: 282 GNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK RI PRHIQLAVRNDEE +KLLG VTIANGGV+P
Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMP 111
>TAIR9_protein||AT3G20670.1 | Symbols: HTA13 | HTA13; DNA binding |
chr3:7229472-7229963 FORWARD
Length = 133
Score = 131 bits (328), Expect = 2e-031
Identities = 67/103 (65%), Positives = 72/103 (69%)
Frame = +3
Query: 102 GKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXXX 281
G A KS SRSSKAGLQFPVGR+ARFLK G+YA RVG G+P
Sbjct: 9 GSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELA 68
Query: 282 GNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK RI PRHIQLAVRNDEE +KLLG VTIANGGV+P
Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMP 111
>TAIR9_protein||AT5G54640.1 | Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO
AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22196540-22197279
FORWARD
Length = 131
Score = 131 bits (327), Expect = 2e-031
Identities = 66/103 (64%), Positives = 73/103 (70%)
Frame = +3
Query: 102 GKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXXX 281
G A K+ SRSSKAGLQFPVGR+ARFLK G+YA+RVG G+P
Sbjct: 9 GSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELA 68
Query: 282 GNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK RI PRHIQLAVRNDEE +KLLG VTIANGGV+P
Sbjct: 69 GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMP 111
>TAIR9_protein||AT5G59870.1 | Symbols: HTA6 | HTA6; DNA binding |
chr5:24115605-24116144 REVERSE
Length = 151
Score = 131 bits (327), Expect = 2e-031
Identities = 67/104 (64%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Frame = +3
Query: 99 PGKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXX 278
PG PK TKSVS+S KAGLQFPVGR+ RFLKKGRYAQR+GGG+P
Sbjct: 17 PGAPK-TKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLEL 75
Query: 279 XGNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKK+RI PRH+ LA+RNDEE KLL VTIA+GGVLP
Sbjct: 76 AGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLP 119
>TAIR9_protein||AT5G27670.1 | Symbols: HTA7 | HTA7 (HISTONE H2A 7); DNA binding
| chr5:9792807-9793365 REVERSE
Length = 151
Score = 118 bits (295), Expect = 1e-027
Identities = 60/97 (61%), Positives = 68/97 (70%)
Frame = +3
Query: 120 KSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXXXGNAAFD 299
KSVS+S KAGLQFPVGR+AR+LKKGRYA R G G+P GNAA D
Sbjct: 24 KSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLEYLAAEVLELAGNAARD 83
Query: 300 NKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
NKKNRI PRH+ LA+RNDEE +LL VTIA+GGVLP
Sbjct: 84 NKKNRINPRHLCLAIRNDEELGRLLHGVTIASGGVLP 120
>TAIR9_protein||AT5G02560.1 | Symbols: HTA12 | HTA12; DNA binding |
chr5:575437-576456 FORWARD
Length = 154
Score = 117 bits (291), Expect = 4e-027
Identities = 62/103 (60%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Frame = +3
Query: 102 GKPKATKSVSRSSKAGLQFPVGRVARFLKKGRYAQRVGGGSPXXXXXXXXXXXXXXXXXX 281
G PK K VSRS K+GLQFPVGR+ R+LKKGRY++RVG G+P
Sbjct: 18 GGPK-KKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELA 76
Query: 282 GNAAFDNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
GNAA DNKKNRI PRH+ LAVRNDEE LL VTIA+GGVLP
Sbjct: 77 GNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLP 119
>TAIR9_protein||AT2G38810.1 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 80 bits (196), Expect = 4e-016
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +3
Query: 120 KSVSRSSKAGLQFPVGRVARFLKKGRYAQ-RVGGGSPXXXXXXXXXXXXXXXXXXGNAAF 296
KS+SRSS+AG+QFPVGR+ R LK+ A RVG + GNA+
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 297 DNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
D K RITPRH+QLA+R DEE L+ TIA GGV+P
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIP 123
>TAIR9_protein||AT2G38810.3 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 80 bits (196), Expect = 4e-016
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +3
Query: 120 KSVSRSSKAGLQFPVGRVARFLKKGRYAQ-RVGGGSPXXXXXXXXXXXXXXXXXXGNAAF 296
KS+SRSS+AG+QFPVGR+ R LK+ A RVG + GNA+
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 297 DNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
D K RITPRH+QLA+R DEE L+ TIA GGV+P
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIP 123
>TAIR9_protein||AT2G38810.2 | Symbols: HTA8 | HTA8 (HISTONE H2A 8); DNA binding
| chr2:16219444-16220679 REVERSE
Length = 137
Score = 80 bits (196), Expect = 4e-016
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +3
Query: 120 KSVSRSSKAGLQFPVGRVARFLKKGRYAQ-RVGGGSPXXXXXXXXXXXXXXXXXXGNAAF 296
KS+SRSS+AG+QFPVGR+ R LK+ A RVG + GNA+
Sbjct: 27 KSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 297 DNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
D K RITPRH+QLA+R DEE L+ TIA GGV+P
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIP 123
>TAIR9_protein||AT3G54560.1 | Symbols: HTA11 | HTA11; DNA binding |
chr3:20196532-20197466 FORWARD
Length = 137
Score = 76 bits (186), Expect = 5e-015
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +3
Query: 120 KSVSRSSKAGLQFPVGRVARFLKKGRYAQ-RVGGGSPXXXXXXXXXXXXXXXXXXGNAAF 296
K +SRS++AG+QFPVGR+ R LK A RVG + GNA+
Sbjct: 27 KPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86
Query: 297 DNKKNRITPRHIQLAVRNDEEFTKLLGSVTIANGGVLP 410
D K RITPRH+QLA+R DEE L+ TIA GGV+P
Sbjct: 87 DLKVKRITPRHLQLAIRGDEELDTLIKG-TIAGGGVIP 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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