BLASTX 7.6.2
Query= RU45138 /QuerySize=400
(399 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G48830.1 | Symbols: | 40S ribosomal protein S... 136 4e-033
TAIR9_protein||AT1G48830.2 | Symbols: | 40S ribosomal protein S... 136 4e-033
TAIR9_protein||AT3G02560.1 | Symbols: | 40S ribosomal protein S... 130 3e-031
TAIR9_protein||AT3G02560.2 | Symbols: | 40S ribosomal protein S... 130 3e-031
TAIR9_protein||AT5G16130.1 | Symbols: | 40S ribosomal protein S... 126 7e-030
>TAIR9_protein||AT1G48830.1 | Symbols: | 40S ribosomal protein S7 (RPS7A) |
chr1:18059854-18060935 REVERSE
Length = 192
Score = 136 bits (342), Expect = 4e-033
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +3
Query: 147 LKSRLRKHLFDLENTNQELKSELKDLYINSAVQVDVAGNRKAVVVHVFYRLRKAYRKIHV 326
L ++ + FDLENTNQELKSELKDLY+NSAVQVD++G RKA+VV+V YRLRKAYRKIHV
Sbjct: 19 LDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHV 78
Query: 327 RLVRELEKKFSGKDVILIATRRIV 398
RLVRELEKKFSGKDVILIATRRIV
Sbjct: 79 RLVRELEKKFSGKDVILIATRRIV 102
>TAIR9_protein||AT1G48830.2 | Symbols: | 40S ribosomal protein S7 (RPS7A) |
chr1:18059854-18060935 REVERSE
Length = 192
Score = 136 bits (342), Expect = 4e-033
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +3
Query: 147 LKSRLRKHLFDLENTNQELKSELKDLYINSAVQVDVAGNRKAVVVHVFYRLRKAYRKIHV 326
L ++ + FDLENTNQELKSELKDLY+NSAVQVD++G RKA+VV+V YRLRKAYRKIHV
Sbjct: 19 LDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHV 78
Query: 327 RLVRELEKKFSGKDVILIATRRIV 398
RLVRELEKKFSGKDVILIATRRIV
Sbjct: 79 RLVRELEKKFSGKDVILIATRRIV 102
>TAIR9_protein||AT3G02560.1 | Symbols: | 40S ribosomal protein S7 (RPS7B) |
chr3:542341-543168 FORWARD
Length = 192
Score = 130 bits (326), Expect = 3e-031
Identities = 63/83 (75%), Positives = 77/83 (92%)
Frame = +3
Query: 150 KSRLRKHLFDLENTNQELKSELKDLYINSAVQVDVAGNRKAVVVHVFYRLRKAYRKIHVR 329
+ ++ + LFDLENTNQELKSELKDLYIN AVQ+D++GNRKAVV++V +RLRKA+RKIH+R
Sbjct: 20 EEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLR 79
Query: 330 LVRELEKKFSGKDVILIATRRIV 398
LVRELEKKFSGKDVI +ATRRI+
Sbjct: 80 LVRELEKKFSGKDVIFVATRRIM 102
>TAIR9_protein||AT3G02560.2 | Symbols: | 40S ribosomal protein S7 (RPS7B) |
chr3:542341-543168 FORWARD
Length = 192
Score = 130 bits (326), Expect = 3e-031
Identities = 63/83 (75%), Positives = 77/83 (92%)
Frame = +3
Query: 150 KSRLRKHLFDLENTNQELKSELKDLYINSAVQVDVAGNRKAVVVHVFYRLRKAYRKIHVR 329
+ ++ + LFDLENTNQELKSELKDLYIN AVQ+D++GNRKAVV++V +RLRKA+RKIH+R
Sbjct: 20 EEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLR 79
Query: 330 LVRELEKKFSGKDVILIATRRIV 398
LVRELEKKFSGKDVI +ATRRI+
Sbjct: 80 LVRELEKKFSGKDVIFVATRRIM 102
>TAIR9_protein||AT5G16130.1 | Symbols: | 40S ribosomal protein S7 (RPS7C) |
chr5:5268984-5269912 FORWARD
Length = 191
Score = 126 bits (314), Expect = 7e-030
Identities = 61/83 (73%), Positives = 74/83 (89%)
Frame = +3
Query: 150 KSRLRKHLFDLENTNQELKSELKDLYINSAVQVDVAGNRKAVVVHVFYRLRKAYRKIHVR 329
+ ++ + LFDLENTNQELKSELKDLYIN AV +D++GNRKAVV++V +RLRKA+RKIH R
Sbjct: 20 EEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKAVVIYVPFRLRKAFRKIHPR 79
Query: 330 LVRELEKKFSGKDVILIATRRIV 398
LVRELEKKFSGKDVI + TRRI+
Sbjct: 80 LVRELEKKFSGKDVIFVTTRRIM 102
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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