BLASTX 7.6.2
Query= RU45525 /QuerySize=238
(237 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding pr... 126 3e-030
TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcr... 123 2e-029
TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1... 119 5e-028
TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding pr... 93 2e-020
TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-rel... 88 8e-019
TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); tr... 63 3e-011
TAIR9_protein||AT3G25990.1 | Symbols: | DNA-binding protein GT-... 56 3e-009
TAIR9_protein||AT1G13450.1 | Symbols: | DNA binding protein GT-... 51 1e-007
TAIR9_protein||AT1G13450.2 | Symbols: | DNA binding protein GT-... 51 1e-007
TAIR9_protein||AT1G13450.3 | Symbols: | DNA binding protein GT-... 51 1e-007
>TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding protein, putative
| chr1:28865594-28867931 FORWARD
Length = 604
Score = 126 bits (315), Expect = 3e-030
Identities = 53/77 (68%), Positives = 69/77 (89%)
Frame = -2
Query: 236 SNYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPED 57
+N D +YQENG KG LWEEISA M++LG++RN+KRCKEKWENINKY++++K+SNKKRPED
Sbjct: 422 TNLDSKYQENGPKGPLWEEISAGMRRLGFNRNSKRCKEKWENINKYFKKVKESNKKRPED 481
Query: 56 SKTCAYYNVLDALYNKK 6
SKTC Y++ LDALY ++
Sbjct: 482 SKTCPYFHQLDALYRER 498
Score = 69 bits (166), Expect = 6e-013
Identities = 32/78 (41%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -2
Query: 236 SNYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPED 57
S+ + +++ KG LWEE+S M + GY RNAK+CKEK+EN+ KY++R K+ + E
Sbjct: 75 SDMGIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCKEKFENVYKYHKRTKEGRTGKSE- 133
Query: 56 SKTCAYYNVLDALYNKKT 3
KT +++ L+AL ++ T
Sbjct: 134 GKTYRFFDQLEALESQST 151
>TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcription factor |
chr1:28873211-28875203 REVERSE
Length = 576
Score = 123 bits (308), Expect = 2e-029
Identities = 52/76 (68%), Positives = 68/76 (89%)
Frame = -2
Query: 233 NYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDS 54
N + YQENG+KG LWEEISA M++LGY+R+AKRCKEKWENINKY++++K+SNKKRP DS
Sbjct: 412 NLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKWENINKYFKKVKESNKKRPLDS 471
Query: 53 KTCAYYNVLDALYNKK 6
KTC Y++ L+ALYN++
Sbjct: 472 KTCPYFHQLEALYNER 487
Score = 64 bits (155), Expect = 1e-011
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = -2
Query: 236 SNYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPED 57
S D ++++ K LWEEIS M +LGY R++K+CKEK+EN+ KY++R K+ + E
Sbjct: 55 SEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKYHKRTKEGRTGKSE- 113
Query: 56 SKTCAYYNVLDA 21
KT ++ L+A
Sbjct: 114 GKTYRFFEELEA 125
>TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1 (GT2-LIKE 1);
DNA binding / transcription factor | chr1:12051859-12054320 REVERSE
Length = 670
Score = 119 bits (296), Expect = 5e-028
Identities = 51/77 (66%), Positives = 65/77 (84%)
Frame = -2
Query: 236 SNYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPED 57
S + +YQ+N KG LWEEIS SMK++GY+RNAKRCKEKWENINKYY+++K+SNKKRP+D
Sbjct: 449 SGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESNKKRPQD 508
Query: 56 SKTCAYYNVLDALYNKK 6
+KTC Y++ LD LY K
Sbjct: 509 AKTCPYFHRLDLLYRNK 525
Score = 64 bits (155), Expect = 1e-011
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -2
Query: 236 SNYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPED 57
S+ D +++ K LWE +S + +LGY R++K+CKEK+EN+ KYY+R K++ R D
Sbjct: 76 SDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKYYKRTKETRGGR-HD 134
Query: 56 SKTCAYYNVLDAL 18
K +++ L+AL
Sbjct: 135 GKAYKFFSQLEAL 147
>TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding protein, putative
| chr5:10292789-10295101 REVERSE
Length = 620
Score = 93 bits (230), Expect = 2e-020
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = -2
Query: 191 LWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDSKTCAYYNVLDALYN 12
LWE IS M ++GY R+AKRCKEKWENINKY+R+ KD NKKRP DS+TC Y++ L ALY+
Sbjct: 498 LWERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALYS 557
Query: 11 K 9
+
Sbjct: 558 Q 558
>TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-related |
chr5:19313008-19314636 FORWARD
Length = 399
Score = 88 bits (217), Expect = 8e-019
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = -2
Query: 236 SNYDLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPED 57
S D++ + +KG +W+EISA MK+ GY+R+AK+CKEKWEN+NKYYRR+ + +K+PE
Sbjct: 315 SRSDVEEKTGINKGAIWDEISARMKERGYERSAKKCKEKWENMNKYYRRVTEGGQKQPEH 374
Query: 56 SKTCAYYNVLDALY 15
SKT +Y+ L Y
Sbjct: 375 SKTRSYFEKLGNFY 388
>TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); transcription
factor | chr5:957858-960760 FORWARD
Length = 592
Score = 63 bits (152), Expect = 3e-011
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = -2
Query: 227 DLQYQENGSKGHLWEEISASM-KKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDSK 51
D +++E KG LW+E+S M ++ GY R+ K+C+EK+EN+ KYYR+ K+ R +D K
Sbjct: 136 DHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYRKTKEGKAGR-QDGK 194
Query: 50 TCAYYNVLDALY 15
++ L+ALY
Sbjct: 195 HYRFFRQLEALY 206
Score = 53 bits (125), Expect = 4e-008
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Frame = -2
Query: 191 LWEEISASMKKLGYD-RNAKRCKEKWENINKYYRR-LKDSNKKRPEDSKTCAYY---NVL 27
LWEEI+A + +LG+D R+A CKEKWE I+ R+ K NKKR ++S +C Y N
Sbjct: 453 LWEEIAAKLIQLGFDQRSALLCKEKWEWISNGMRKEKKQINKKRKDNSSSCGVYYPRNEE 512
Query: 26 DALYN 12
+ +YN
Sbjct: 513 NPIYN 517
>TAIR9_protein||AT3G25990.1 | Symbols: | DNA-binding protein GT-1-related |
chr3:9504846-9506703 REVERSE
Length = 373
Score = 56 bits (134), Expect = 3e-009
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -2
Query: 227 DLQYQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDSKT 48
D + + S HLWE+IS M++ G+DR+ C +KW NI K +++ K K T
Sbjct: 71 DNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDKWRNILKEFKKAKQHEDKATSGGST 130
Query: 47 -CAYYNVLDALYNKK 6
+YYN ++ ++ ++
Sbjct: 131 KMSYYNEIEDIFRER 145
>TAIR9_protein||AT1G13450.1 | Symbols: | DNA binding protein GT-1 |
chr1:4612999-4615115 REVERSE
Length = 407
Score = 51 bits (120), Expect = 1e-007
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = -2
Query: 218 YQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDSKTCAY 39
+ + S HLWE+IS+ M++ G+DR+ C +KW N+ K +++ K + R S +Y
Sbjct: 106 FNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK--HHDRGNGSAKMSY 163
Query: 38 YNVLDALYNKKT 3
Y ++ + +++
Sbjct: 164 YKEIEDILRERS 175
>TAIR9_protein||AT1G13450.2 | Symbols: | DNA binding protein GT-1 |
chr1:4612999-4615115 REVERSE
Length = 362
Score = 51 bits (120), Expect = 1e-007
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = -2
Query: 218 YQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDSKTCAY 39
+ + S HLWE+IS+ M++ G+DR+ C +KW N+ K +++ K + R S +Y
Sbjct: 106 FNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK--HHDRGNGSAKMSY 163
Query: 38 YNVLDALYNKKT 3
Y ++ + +++
Sbjct: 164 YKEIEDILRERS 175
>TAIR9_protein||AT1G13450.3 | Symbols: | DNA binding protein GT-1 |
chr1:4613708-4615115 REVERSE
Length = 279
Score = 51 bits (120), Expect = 1e-007
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = -2
Query: 218 YQENGSKGHLWEEISASMKKLGYDRNAKRCKEKWENINKYYRRLKDSNKKRPEDSKTCAY 39
+ + S HLWE+IS+ M++ G+DR+ C +KW N+ K +++ K + R S +Y
Sbjct: 106 FNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK--HHDRGNGSAKMSY 163
Query: 38 YNVLDALYNKKT 3
Y ++ + +++
Sbjct: 164 YKEIEDILRERS 175
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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