BLASTX 7.6.2
Query= RU46620 /QuerySize=167
(166 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G80000.1 | Symbols: | FUNCTIONS IN: molecular... 47 3e-006
TAIR9_protein||AT1G80000.2 | Symbols: | FUNCTIONS IN: molecular... 47 3e-006
>TAIR9_protein||AT1G80000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis
thaliana protein match is: glycine-rich protein (TAIR:AT1G15280.2); Has
2243 Blast hits to 1704 proteins in 212 species: Archae - 16; Bacteria
- 151; Metazoa - 691; Fungi - 281; Plants - 163; Viruses - 64; Other
Eukaryotes - 877 (source: NCBI BLink). | chr1:30093195-30096742
FORWARD
Length = 606
Score = 47 bits (109), Expect = 3e-006
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 86 PFAVPTAGAFYMHDDRFRDNAGGRNRR 166
PFAVPTAGAFYMHDDRF++ NRR
Sbjct: 131 PFAVPTAGAFYMHDDRFQELDAASNRR 157
>TAIR9_protein||AT1G80000.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis
thaliana protein match is: glycine-rich protein (TAIR:AT1G15280.2); Has
2243 Blast hits to 1704 proteins in 212 species: Archae - 16; Bacteria
- 151; Metazoa - 691; Fungi - 281; Plants - 163; Viruses - 64; Other
Eukaryotes - 877 (source: NCBI BLink). | chr1:30093195-30096742
FORWARD
Length = 606
Score = 47 bits (109), Expect = 3e-006
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2
Query: 86 PFAVPTAGAFYMHDDRFRDNAGGRNRR 166
PFAVPTAGAFYMHDDRF++ NRR
Sbjct: 131 PFAVPTAGAFYMHDDRFQELDAASNRR 157
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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