BLASTX 7.6.2
Query= RU53162 /QuerySize=276
(275 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G65170.1 | Symbols: | VQ motif-containing pro... 93 3e-020
TAIR9_protein||AT4G39720.1 | Symbols: | VQ motif-containing pro... 77 2e-015
TAIR9_protein||AT1G35830.1 | Symbols: | VQ motif-containing pro... 77 2e-015
TAIR9_protein||AT3G22160.1 | Symbols: | VQ motif-containing pro... 60 2e-010
TAIR9_protein||AT4G15120.1 | Symbols: | VQ motif-containing pro... 57 2e-009
>TAIR9_protein||AT5G65170.1 | Symbols: | VQ motif-containing protein |
chr5:26041218-26042306 FORWARD
Length = 363
Score = 93 bits (229), Expect = 3e-020
Identities = 48/62 (77%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
Frame = +2
Query: 62 PKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFT--NSPFPRSRLDLFGSSAPSM 235
PKKRSR SRRAPTTVLTTDT+NFRAMVQEFTG P+ PFT +S FPRSR DLFGSS+ S
Sbjct: 139 PKKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFGSSSSSS 198
Query: 236 VR 241
R
Sbjct: 199 SR 200
>TAIR9_protein||AT4G39720.1 | Symbols: | VQ motif-containing protein |
chr4:18429992-18430864 REVERSE
Length = 291
Score = 77 bits (188), Expect = 2e-015
Identities = 43/61 (70%), Positives = 48/61 (78%), Gaps = 5/61 (8%)
Frame = +2
Query: 65 KKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPF--TNSPFPRSRLDLF---GSSAP 229
KKRSRASRRAPTTVLTTDT+NFRAMVQEFTGIPAPP NS +RL+ F SS+P
Sbjct: 115 KKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPLFNNNSIVNTTRLNTFLGLSSSSP 174
Query: 230 S 232
+
Sbjct: 175 N 175
>TAIR9_protein||AT1G35830.1 | Symbols: | VQ motif-containing protein |
chr1:13321214-13322122 REVERSE
Length = 303
Score = 77 bits (187), Expect = 2e-015
Identities = 39/55 (70%), Positives = 47/55 (85%), Gaps = 3/55 (5%)
Frame = +2
Query: 62 PKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTNSPFPRS--RLDLFGS 220
P+KR+RASRRAPTTVLTTDT+NFRAMVQEFTG+PA PF++ PF + R D+F S
Sbjct: 99 PRKRTRASRRAPTTVLTTDTSNFRAMVQEFTGVPASPFSH-PFSSTTRRFDIFRS 152
>TAIR9_protein||AT3G22160.1 | Symbols: | VQ motif-containing protein |
chr3:7818148-7818726 REVERSE
Length = 193
Score = 60 bits (145), Expect = 2e-010
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = +2
Query: 65 KKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTNSPFPRSRLDLFGSSAPSMVRS 244
++RSRASRR PTT+L TDT+NFRAMVQ++TG P+ S S L SS PS S
Sbjct: 55 RRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSAFSLTSSSDPSAGSS 114
Query: 245 GPGP 256
P
Sbjct: 115 QQAP 118
>TAIR9_protein||AT4G15120.1 | Symbols: | VQ motif-containing protein |
chr4:8634779-8635360 FORWARD
Length = 194
Score = 57 bits (136), Expect = 2e-009
Identities = 34/63 (53%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Frame = +2
Query: 65 KKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIP-APPFTNSPFPRSRLDLFGSSAPSMVR 241
++RSRASRR PTT+ TDT NFRAMVQ+FTG P A F +S P S L S + V
Sbjct: 51 RRRSRASRRTPTTLFNTDTANFRAMVQQFTGGPSAVAFGSS--PSSGFSLTSSDPTAGVS 108
Query: 242 SGP 250
S P
Sbjct: 109 SSP 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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