BLASTX 7.6.2
Query= RU53804 /QuerySize=214
(213 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G12870.1 | Symbols: | S locus F-box-related /... 55 6e-009
TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein | ... 55 1e-008
TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein | ... 54 1e-008
TAIR9_protein||AT2G41473.1 | Symbols: | FUNCTIONS IN: molecular... 54 2e-008
TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein | ... 54 2e-008
TAIR9_protein||AT3G23880.1 | Symbols: | F-box family protein | ... 54 2e-008
TAIR9_protein||AT3G08750.1 | Symbols: | F-box family protein | ... 54 2e-008
TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein | ... 52 5e-008
TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein | ... 52 6e-008
TAIR9_protein||AT1G51290.1 | Symbols: | F-box family protein (F... 52 6e-008
TAIR9_protein||AT5G62510.1 | Symbols: | F-box family protein | ... 52 6e-008
TAIR9_protein||AT3G17710.1 | Symbols: | F-box family protein | ... 52 8e-008
TAIR9_protein||AT2G40910.2 | Symbols: | F-box protein-related |... 51 1e-007
TAIR9_protein||AT2G40910.1 | Symbols: | F-box protein-related |... 51 1e-007
TAIR9_protein||AT4G38870.1 | Symbols: | F-box family protein | ... 51 1e-007
TAIR9_protein||AT1G47390.1 | Symbols: | F-box family protein | ... 50 2e-007
TAIR9_protein||AT1G47765.1 | Symbols: | F-box family protein | ... 50 2e-007
TAIR9_protein||AT4G04690.1 | Symbols: | F-box family protein (F... 50 2e-007
TAIR9_protein||AT2G14710.1 | Symbols: | F-box family protein | ... 50 2e-007
TAIR9_protein||AT1G51320.1 | Symbols: | F-box family protein (F... 50 3e-007
TAIR9_protein||AT1G47810.1 | Symbols: | F-box family protein | ... 49 4e-007
TAIR9_protein||AT1G47800.1 | Symbols: | F-box family protein | ... 49 4e-007
TAIR9_protein||AT2G02030.1 | Symbols: | F-box family protein | ... 49 4e-007
TAIR9_protein||AT3G16580.1 | Symbols: | F-box family protein | ... 49 5e-007
TAIR9_protein||AT4G12560.1 | Symbols: | F-box family protein | ... 49 5e-007
TAIR9_protein||AT4G12560.2 | Symbols: | F-box family protein | ... 49 5e-007
TAIR9_protein||AT3G06240.1 | Symbols: | F-box family protein | ... 49 7e-007
TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein | ... 48 9e-007
TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein | ... 48 9e-007
TAIR9_protein||AT3G10240.1 | Symbols: | F-box protein-related |... 48 9e-007
>TAIR9_protein||AT1G12870.1 | Symbols: | S locus F-box-related / SLF-related |
chr1:4387129-4389110 REVERSE
Length = 417
Score = 55 bits (132), Expect = 6e-009
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +1
Query: 34 ITSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPHH 204
I S LP D++EEI L+LPVK+L+RFK +SK W + + F + HL + + H H
Sbjct: 28 IASSSLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDH 84
>TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 390
Score = 55 bits (130), Expect = 1e-008
Identities = 26/52 (50%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 40 SKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSH-LHHSTKQ 192
+ P D+ EILL+LPVKS++RF+CVSK W ++I+D FIK++ ST+Q
Sbjct: 22 TSSFPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQ 73
>TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 303
Score = 54 bits (129), Expect = 1e-008
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHK-FIKSHLHHSTKQHPHHD 207
++P D+ EIL +LP KSLLRF+CVSK WL++IS + FI S + S Q P D
Sbjct: 36 NIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRD 90
>TAIR9_protein||AT2G41473.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810); BEST Arabidopsis thaliana protein match is:
F-box family protein (TAIR:AT3G17710.1). | chr2:17294453-17294728
REVERSE
Length = 92
Score = 54 bits (128), Expect = 2e-008
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHS 183
+L D++ EIL ++PVK LLRF+CV KSW +L D +FI+ H H+
Sbjct: 3 ELAFDLVIEILAKVPVKYLLRFRCVCKSWRSLFQDERFIRMHTTHA 48
>TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein |
chr3:17358591-17359765 FORWARD
Length = 361
Score = 54 bits (128), Expect = 2e-008
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHP 198
+P D+ ILL+LPVKSLLRF+CVSK W ++I+ H F H + ++ P
Sbjct: 12 IPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAP 61
>TAIR9_protein||AT3G23880.1 | Symbols: | F-box family protein |
chr3:8622061-8623155 REVERSE
Length = 365
Score = 54 bits (128), Expect = 2e-008
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSH 171
+LP +++EEILL+LPVKSL RFKCV SW +LIS+ F H
Sbjct: 13 NLPLEMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKH 54
>TAIR9_protein||AT3G08750.1 | Symbols: | F-box family protein |
chr3:2656716-2657825 REVERSE
Length = 370
Score = 54 bits (127), Expect = 2e-008
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHH 180
LP ++IEEIL ++P +SL+RFK K W NLI++ +F+ +HL H
Sbjct: 12 LPFELIEEILYKIPAESLIRFKSTCKKWYNLITEKRFMYNHLDH 55
>TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 380
Score = 52 bits (124), Expect = 5e-008
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 34 ITSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHP 198
+ + ++P D++ EIL +LP KSL+RFKCVSK W +LI F +L T + P
Sbjct: 36 LVAPEIPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRP 90
>TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 397
Score = 52 bits (123), Expect = 6e-008
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +1
Query: 52 PCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSH 171
P D+I EILL+LPVKS+LRF+CVSK WL+ +D F S+
Sbjct: 32 PLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSY 71
>TAIR9_protein||AT1G51290.1 | Symbols: | F-box family protein (FBX10) |
chr1:19012173-19013306 FORWARD
Length = 378
Score = 52 bits (123), Expect = 6e-008
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +1
Query: 34 ITSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPHHDD 210
+ S +LP +++EEIL ++P +SL RF+ V K W +L D+KF+ HL S Q D
Sbjct: 1 MVSVNLPWELVEEILYRVPPQSLARFRTVCKQWNSLFDDNKFVNDHLVRSRPQFMFRTD 59
>TAIR9_protein||AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 421
Score = 52 bits (123), Expect = 6e-008
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPH 201
++P D++ EIL +LP KSL+RFKCVSK W +LI F +L ++ PH
Sbjct: 43 EIPLDLLIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYLTVASPLRPH 94
>TAIR9_protein||AT3G17710.1 | Symbols: | F-box family protein |
chr3:6055597-6056703 FORWARD
Length = 369
Score = 52 bits (122), Expect = 8e-008
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +1
Query: 34 ITSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQ 192
+ S LP D+ EEIL +LP +SL+RF+ V K W L SD +F+K HL + Q
Sbjct: 1 MASVKLPWDLEEEILSRLPPRSLVRFRTVCKHWNGLFSDKRFVKKHLVRARPQ 53
>TAIR9_protein||AT2G40910.2 | Symbols: | F-box protein-related |
chr2:17069938-17071501 REVERSE
Length = 443
Score = 51 bits (121), Expect = 1e-007
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHST-KQHPH 201
++P D++ EI+++LP KS++RFKC+SK W +LIS F S T K+ PH
Sbjct: 61 EIPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPH 113
>TAIR9_protein||AT2G40910.1 | Symbols: | F-box protein-related |
chr2:17069938-17071554 REVERSE
Length = 450
Score = 51 bits (121), Expect = 1e-007
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHST-KQHPH 201
++P D++ EI+++LP KS++RFKC+SK W +LIS F S T K+ PH
Sbjct: 68 EIPPDLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCNSLFTSVTRKKQPH 120
>TAIR9_protein||AT4G38870.1 | Symbols: | F-box family protein |
chr4:18132583-18133863 REVERSE
Length = 427
Score = 51 bits (120), Expect = 1e-007
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +1
Query: 34 ITSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQ 192
+ S+ LP D+I EIL +L +K L+RF CVSK W ++I D F+K L+ S K+
Sbjct: 48 VNSELLPVDLIMEILKKLSLKPLIRFLCVSKLWASIIRDPYFMKLFLNESLKR 100
>TAIR9_protein||AT1G47390.1 | Symbols: | F-box family protein |
chr1:17379544-17380656 FORWARD
Length = 371
Score = 50 bits (119), Expect = 2e-007
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSH 171
LPC++IEEIL ++P +SL+RF+ VSK W L D FI +H
Sbjct: 7 LPCELIEEILSRVPPESLVRFRTVSKKWNALFDDKMFINNH 47
>TAIR9_protein||AT1G47765.1 | Symbols: | F-box family protein |
chr1:17574906-17576092 REVERSE
Length = 386
Score = 50 bits (119), Expect = 2e-007
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +1
Query: 37 TSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFI 162
++ LP D+ EILL+LP KS+ RF+CVSK WL++ +D FI
Sbjct: 22 SASSLPLDLTSEILLRLPEKSIARFRCVSKLWLSITTDPYFI 63
>TAIR9_protein||AT4G04690.1 | Symbols: | F-box family protein (FBX15) |
chr4:2373999-2375135 REVERSE
Length = 379
Score = 50 bits (119), Expect = 2e-007
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 43 KDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPHHDD 210
+ LP +++EEIL + P +SL RFK K W +I+ +F+ +HL HS ++ DD
Sbjct: 9 RSLPFELVEEILKKTPAESLNRFKSTCKQWYGIITSKRFMYNHLDHSPERFIRIDD 64
>TAIR9_protein||AT2G14710.1 | Symbols: | F-box family protein |
chr2:6298936-6300024 FORWARD
Length = 363
Score = 50 bits (118), Expect = 2e-007
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +1
Query: 43 KDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSH 171
K+LP ++IEEIL ++P KSL+RF+ VSK W L D FI +H
Sbjct: 5 KNLPWELIEEILSRVPPKSLVRFRTVSKQWNALFDDKTFINNH 47
>TAIR9_protein||AT1G51320.1 | Symbols: | F-box family protein (FBX11) |
chr1:19025642-19026769 FORWARD
Length = 376
Score = 50 bits (117), Expect = 3e-007
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 34 ITSKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQ 192
+ S +LP +++EEIL ++P +SL++F+ V K W +L D+KF+ H S Q
Sbjct: 1 MVSVNLPWELVEEILCRVPPQSLVKFRTVCKQWNSLFDDNKFVNDHFVQSQPQ 53
>TAIR9_protein||AT1G47810.1 | Symbols: | F-box family protein |
chr1:17603504-17604559 FORWARD
Length = 352
Score = 49 bits (116), Expect = 4e-007
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPHH 204
+P D++ EI L LP K L RF CVSK W +I + FI+S S +++ H
Sbjct: 14 IPVDVLFEIFLNLPAKFLARFVCVSKLWAKIIRNQDFIRSFSFRSFRENKQH 65
>TAIR9_protein||AT1G47800.1 | Symbols: | F-box family protein |
chr1:17601513-17602676 FORWARD
Length = 388
Score = 49 bits (116), Expect = 4e-007
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQ 192
+P D++ EIL++LP KS+ RF CVSK W +I FI+S +S+ Q
Sbjct: 14 IPIDVLFEILVKLPAKSVARFLCVSKVWATMIRGEVFIRSFTSYSSPQ 61
>TAIR9_protein||AT2G02030.1 | Symbols: | F-box family protein |
chr2:482335-483829 FORWARD
Length = 335
Score = 49 bits (116), Expect = 4e-007
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHL 174
+P +I+EEIL++LPVKSL RF+ VSK W LI+ F K H+
Sbjct: 39 IPNEIVEEILVRLPVKSLTRFQTVSKHWRTLITSKYFGKRHM 80
>TAIR9_protein||AT3G16580.1 | Symbols: | F-box family protein |
chr3:5647577-5648725 REVERSE
Length = 383
Score = 49 bits (115), Expect = 5e-007
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1
Query: 40 SKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSH 171
S LP ++IEEIL ++P +SLLRFK VSK W L D FI +H
Sbjct: 12 SLSLPWELIEEILSRVPPESLLRFKTVSKQWNALFRDKTFINNH 55
>TAIR9_protein||AT4G12560.1 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 414
Score = 49 bits (115), Expect = 5e-007
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPH 201
+P DI+ +I L+LP K+L+R + +SK +LI+D FI+SHLH + H
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDH 54
>TAIR9_protein||AT4G12560.2 | Symbols: | F-box family protein |
chr4:7441815-7443157 FORWARD
Length = 414
Score = 49 bits (115), Expect = 5e-007
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHLHHSTKQHPH 201
+P DI+ +I L+LP K+L+R + +SK +LI+D FI+SHLH + H
Sbjct: 4 IPMDIVNDIFLRLPAKTLVRCRALSKPCYHLINDPDFIESHLHRVLQTGDH 54
>TAIR9_protein||AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD
Length = 428
Score = 49 bits (114), Expect = 7e-007
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKSHL 174
LP +II EILL+LP KS+ RF+CVSK + L SD F K HL
Sbjct: 36 LPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHL 77
>TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 400
Score = 48 bits (113), Expect = 9e-007
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +1
Query: 49 LPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFIKS 168
+P D+ EIL +LP KSL++FKCVSK W ++I + FI S
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDS 48
>TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 391
Score = 48 bits (113), Expect = 9e-007
Identities = 20/38 (52%), Positives = 31/38 (81%)
Frame = +1
Query: 46 DLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKF 159
++P +++ +IL++LP KSL+RFKCVSK WL+LI+ F
Sbjct: 26 EIPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYF 63
>TAIR9_protein||AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 390
Score = 48 bits (113), Expect = 9e-007
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 40 SKDLPCDIIEEILLQLPVKSLLRFKCVSKSWLNLISDHKFI 162
S +P D++ EILL+LP KS+ RF+CVSK W ++ ++ FI
Sbjct: 24 SSSIPLDLVSEILLRLPEKSVARFRCVSKPWSSITTEPYFI 64
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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