BLASTX 7.6.2
Query= RU60216 /QuerySize=341
(340 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03110.1 | Symbols: | FUNCTIONS IN: molecular... 90 2e-019
TAIR9_protein||AT2G37100.1 | Symbols: | protamine P1 family pro... 78 7e-016
>TAIR9_protein||AT5G03110.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; BEST Arabidopsis thaliana protein match is: protamine P1
family protein (TAIR:AT2G37100.1); Has 43 Blast hits to 42 proteins in
5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:730346-731197 FORWARD
Length = 284
Score = 90 bits (222), Expect = 2e-019
Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 8/78 (10%)
Frame = -1
Query: 283 MKLPAKPISSPGRSDKFPPPLMRFLRSNVG--------SKSRGRLRASPMFVRKKNTTAV 128
M + +P+SSPGR +K+PPP M FLRS S+SRGR RASP+FVR+ + A
Sbjct: 1 MMISRRPVSSPGRVEKYPPPFMGFLRSKSNGGSTSRSRSRSRGRSRASPLFVRRNKSAAA 60
Query: 127 ETQEPSSPKVTCMGQVRV 74
QEPSSPKVTCMGQVRV
Sbjct: 61 VAQEPSSPKVTCMGQVRV 78
>TAIR9_protein||AT2G37100.1 | Symbols: | protamine P1 family protein |
chr2:15591147-15592040 FORWARD
Length = 298
Score = 78 bits (191), Expect = 7e-016
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = -1
Query: 271 AKPISSPGRSDKFPPPLMRFLRSNVGSKSRGRLRASPMFVRKKNTTAVETQEPSSPKVTC 92
++P+SSPGR++ PP LMRFLR+ S+SR R R F RK + A ETQEP+SPKVTC
Sbjct: 6 SRPVSSPGRTEN-PPLLMRFLRTKSRSRSRSRSRRPIFFRRKNASAAAETQEPTSPKVTC 64
Query: 91 MGQVRV 74
MGQVR+
Sbjct: 65 MGQVRI 70
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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