BLASTX 7.6.2
Query= RU60677 /QuerySize=617
(616 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54210.1 | Symbols: | ribosomal protein L17 f... 201 3e-052
TAIR9_protein||AT5G09770.1 | Symbols: | ribosomal protein L17 f... 70 9e-013
TAIR9_protein||AT5G64650.1 | Symbols: | ribosomal protein L17 f... 68 3e-012
>TAIR9_protein||AT3G54210.1 | Symbols: | ribosomal protein L17 family protein |
chr3:20067672-20068385 REVERSE
Length = 212
Score = 201 bits (511), Expect = 3e-052
Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 3/119 (2%)
Frame = +3
Query: 267 SFTGLSPFNPL---GLSDNTSFEHNFTIIDNGGRVYAMRHGRKVPKLNRPPDQRKALLRG 437
SF+GLSP NPL GL D SFE+ F I+D GGR+YAMRHGR+VPKLNRPPDQRKALLRG
Sbjct: 59 SFSGLSPVNPLLSIGLPDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRG 118
Query: 438 LTTQLLKHGRIKTTRARASAMRKYVDKMITLAKEGSLHKRRQALGFIYEKQIVHALFAE 614
LTTQLLKHGRIKTTRARASAMRK+VDKMITLAK+GSLHKRRQALG+IYEKQIVHALFAE
Sbjct: 119 LTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAE 177
>TAIR9_protein||AT5G09770.1 | Symbols: | ribosomal protein L17 family protein |
chr5:3035267-3036518 REVERSE
Length = 161
Score = 70 bits (170), Expect = 9e-013
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 384 KVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKEGSLHKRRQ 563
K KL RP R ++LR + +QL+KH RI+TT +A +R+ D MI L KEGSL R+
Sbjct: 3 KFRKLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMIQLGKEGSLSAARR 62
Query: 564 ALGFIYEKQIVHALFAE 614
A GF+ ++H +F E
Sbjct: 63 AAGFVRGDDVLHKIFTE 79
>TAIR9_protein||AT5G64650.1 | Symbols: | ribosomal protein L17 family protein |
chr5:25839542-25840775 REVERSE
Length = 161
Score = 68 bits (165), Expect = 3e-012
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +3
Query: 384 KVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKEGSLHKRRQ 563
K KL RP R ++LR + +QL++H RI+TT +A +R+ D MI L KEGSL R+
Sbjct: 3 KFRKLGRPAGHRMSMLRTMVSQLVQHERIETTVTKAKEVRRLADNMIQLGKEGSLAAARR 62
Query: 564 ALGFIYEKQIVHALFAE 614
A GF+ ++H +F E
Sbjct: 63 AAGFVRGDDVLHKIFTE 79
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
|