BLASTX 7.6.2
Query= RU60853 /QuerySize=358
(357 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G11020.1 | Symbols: | zinc finger (C3HC4-type... 166 3e-042
TAIR9_protein||AT2G22120.1 | Symbols: | protein binding / zinc ... 124 9e-030
TAIR9_protein||AT1G50440.1 | Symbols: | zinc finger (C3HC4-type... 106 2e-024
TAIR9_protein||AT1G50440.2 | Symbols: | zinc finger (C3HC4-type... 106 2e-024
TAIR9_protein||AT1G50440.3 | Symbols: | zinc finger (C3HC4-type... 106 2e-024
>TAIR9_protein||AT1G11020.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:3676968-3678350 FORWARD
Length = 322
Score = 166 bits (419), Expect = 3e-042
Identities = 83/101 (82%), Positives = 88/101 (87%), Gaps = 4/101 (3%)
Frame = +2
Query: 65 EDLEN-GSSIACCRICLESDAE-PGDELISPCLCKGTQQFVHSSCLDHWRSVKEGFAFSH 238
EDLEN SS CCRICLE D+E GDELISPC+CKGTQQFVH SCLDHWRSVKEGFAFSH
Sbjct: 51 EDLENDASSAPCCRICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSH 110
Query: 239 CTTCKAQFHLRVESYED-NSW-RKIKFRIFVARDVFLVFVA 355
CTTCKAQFHLRVE +ED NSW RK KFR+FVARDV LVF+A
Sbjct: 111 CTTCKAQFHLRVEPFEDNNSWRRKAKFRLFVARDVLLVFLA 151
>TAIR9_protein||AT2G22120.1 | Symbols: | protein binding / zinc ion binding |
chr2:9394026-9396768 FORWARD
Length = 325
Score = 124 bits (311), Expect = 9e-030
Identities = 52/86 (60%), Positives = 66/86 (76%), Gaps = 3/86 (3%)
Frame = +2
Query: 98 CRICLESDAEPGDELISPCLCKGTQQFVHSSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 277
CRICLE+D G + I+PC CKGT ++VH CLDHWR++KEGFAF+HCTTCKA ++LRV
Sbjct: 35 CRICLETD---GRDFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVH 91
Query: 278 SYEDNSWRKIKFRIFVARDVFLVFVA 355
S D WR +KFR FV RD+ +F+A
Sbjct: 92 SAGDRKWRTLKFRFFVTRDILSIFLA 117
>TAIR9_protein||AT1G50440.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18686099-18687646 FORWARD
Length = 251
Score = 106 bits (264), Expect = 2e-024
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Frame = +2
Query: 98 CRICLESDAEPGDELISPCLCKGTQQFVHSSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 277
CRICL+ G++LI+PC CKGTQ+ VH SCLD+WRS KEGFAFSHCT C+A F LR
Sbjct: 64 CRICLDVG---GEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRAN 120
Query: 278 SYEDNSWRKIKFRIFVARDVFLVFVA 355
D W +++F++ VARD +F++
Sbjct: 121 VPADRWWLRLRFQLLVARDHAFIFIS 146
>TAIR9_protein||AT1G50440.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18686099-18687646 FORWARD
Length = 251
Score = 106 bits (264), Expect = 2e-024
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Frame = +2
Query: 98 CRICLESDAEPGDELISPCLCKGTQQFVHSSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 277
CRICL+ G++LI+PC CKGTQ+ VH SCLD+WRS KEGFAFSHCT C+A F LR
Sbjct: 64 CRICLDVG---GEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRAN 120
Query: 278 SYEDNSWRKIKFRIFVARDVFLVFVA 355
D W +++F++ VARD +F++
Sbjct: 121 VPADRWWLRLRFQLLVARDHAFIFIS 146
>TAIR9_protein||AT1G50440.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:18686099-18687646 FORWARD
Length = 251
Score = 106 bits (264), Expect = 2e-024
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Frame = +2
Query: 98 CRICLESDAEPGDELISPCLCKGTQQFVHSSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 277
CRICL+ G++LI+PC CKGTQ+ VH SCLD+WRS KEGFAFSHCT C+A F LR
Sbjct: 64 CRICLDVG---GEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRAN 120
Query: 278 SYEDNSWRKIKFRIFVARDVFLVFVA 355
D W +++F++ VARD +F++
Sbjct: 121 VPADRWWLRLRFQLLVARDHAFIFIS 146
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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