BLASTX 7.6.2
Query= RU60902 /QuerySize=727
(726 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G33310.1 | Symbols: IAA13 | IAA13; transcripti... 89 3e-018
TAIR9_protein||AT2G33310.3 | Symbols: IAA13 | IAA13; transcripti... 89 3e-018
TAIR9_protein||AT2G33310.2 | Symbols: IAA13 | IAA13; transcripti... 88 4e-018
TAIR9_protein||AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-... 83 2e-016
TAIR9_protein||AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-... 83 2e-016
TAIR9_protein||AT1G04100.1 | Symbols: IAA10 | IAA10; transcripti... 80 1e-015
TAIR9_protein||AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-AC... 65 3e-011
TAIR9_protein||AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-AC... 65 3e-011
TAIR9_protein||AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-AC... 54 9e-008
TAIR9_protein||AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOC... 54 1e-007
TAIR9_protein||AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOL... 50 1e-006
>TAIR9_protein||AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 89 bits (218), Expect = 3e-018
Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 14/120 (11%)
Frame = +2
Query: 338 TAGTKRSADSVXXXXX----XXQVVGWPPTRAYRMNSLV-HQAKSSATEVFNSEKGECQI 502
+ G+KR+ADS QVVGWPP ++RMNSLV +QA SA E E G+ ++
Sbjct: 53 SVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSARE--EEEAGKKKV 110
Query: 503 TSGKGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMF 682
+ ++ N + G F+KVNMDG IGRKV+L AHSSYE LAQTLEDMF
Sbjct: 111 KDDEPKDVTKKVNGKVQVG-------FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF 163
>TAIR9_protein||AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 89 bits (218), Expect = 3e-018
Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 14/120 (11%)
Frame = +2
Query: 338 TAGTKRSADSVXXXXX----XXQVVGWPPTRAYRMNSLV-HQAKSSATEVFNSEKGECQI 502
+ G+KR+ADS QVVGWPP ++RMNSLV +QA SA E E G+ ++
Sbjct: 53 SVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSARE--EEEAGKKKV 110
Query: 503 TSGKGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMF 682
+ ++ N + G F+KVNMDG IGRKV+L AHSSYE LAQTLEDMF
Sbjct: 111 KDDEPKDVTKKVNGKVQVG-------FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF 163
>TAIR9_protein||AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 248
Score = 88 bits (217), Expect = 4e-018
Identities = 56/121 (46%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Frame = +2
Query: 338 TAGTKRSADSVXXX-----XXXXQVVGWPPTRAYRMNSLV-HQAKSSATEVFNSEKGECQ 499
+ G+KR+ADS QVVGWPP ++RMNSLV +QA SA E E G+ +
Sbjct: 53 SVGSKRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSARE--EEEAGKKK 110
Query: 500 ITSGKGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDM 679
+ + ++ N + G F+KVNMDG IGRKV+L AHSSYE LAQTLEDM
Sbjct: 111 VKDDEPKDVTKKVNGKVQVG-------FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDM 163
Query: 680 F 682
F
Sbjct: 164 F 164
>TAIR9_protein||AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 174
Score = 83 bits (203), Expect = 2e-016
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Frame = +2
Query: 338 TAGTKRSADSVXXXXX----XXQVVGWPPTRAYRMNSLVHQAKSSATEVFNSEKGECQIT 505
+ G+KRSA+S QVVGWPP +RMNSLV+ + A + +E+G+ +
Sbjct: 47 SVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVN---NQAMKAARAEEGDGEKK 103
Query: 506 SGKGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQ 685
K + + + + K ++ FVKVNMDG IGRKV++ AHSSYE LAQTLE+MF
Sbjct: 104 VVKND---ELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFF 160
Query: 686 G 688
G
Sbjct: 161 G 161
>TAIR9_protein||AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 240
Score = 83 bits (203), Expect = 2e-016
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Frame = +2
Query: 338 TAGTKRSADSVXXXXX----XXQVVGWPPTRAYRMNSLVHQAKSSATEVFNSEKGECQIT 505
+ G+KRSA+S QVVGWPP +RMNSLV+ + A + +E+G+ +
Sbjct: 47 SVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVN---NQAMKAARAEEGDGEKK 103
Query: 506 SGKGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQ 685
K + + + + K ++ FVKVNMDG IGRKV++ AHSSYE LAQTLE+MF
Sbjct: 104 VVKND---ELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFF 160
Query: 686 G 688
G
Sbjct: 161 G 161
>TAIR9_protein||AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 262
Score = 80 bits (195), Expect = 1e-015
Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Frame = +2
Query: 341 AGTKRSADS--VXXXXXXXQV-VGWPPTRAYRMNSLVHQAKSSATEVFNSEKGECQITSG 511
+GTKRSADS QV VGWPP R YR+NSLV+QAKS ATE G + T+
Sbjct: 73 SGTKRSADSSPAAASNATRQVAVGWPPLRTYRINSLVNQAKSLATE-GGLSSGIQKETTK 131
Query: 512 KGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMF 682
+ + ++A + R +S+ VKV MDG IGRKV+L A SY AL +TL+ MF
Sbjct: 132 SVVVAAKNDDACFIKSSR--TSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMF 186
>TAIR9_protein||AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor | chr4:14142288-14143755 FORWARD
Length = 247
Score = 65 bits (158), Expect = 3e-011
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +2
Query: 530 QENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSANAKL 709
Q N N + ++ +S+FVKV MDG PIGRK++L AH YE+L+ TLE+MF P ++
Sbjct: 121 QAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT 180
Query: 710 IRSGG 724
+ + G
Sbjct: 181 LETDG 185
Score = 59 bits (142), Expect = 2e-009
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = +2
Query: 332 NVTAGTKRSADSVXXXXXXXQVVGWPPTRAYRMNSLVHQAKSSATEVFNSE 484
+V AG KR+ADS+ QVVGWPP R YRMNS+V+QAK+SATE N E
Sbjct: 70 SVIAGIKRTADSM--AATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLE 118
>TAIR9_protein||AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor | chr4:14142288-14143928 FORWARD
Length = 303
Score = 65 bits (158), Expect = 3e-011
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +2
Query: 530 QENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSANAKL 709
Q N N + ++ +S+FVKV MDG PIGRK++L AH YE+L+ TLE+MF P ++
Sbjct: 121 QAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRT 180
Query: 710 IRSGG 724
+ + G
Sbjct: 181 LETDG 185
Score = 59 bits (142), Expect = 2e-009
Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Frame = +2
Query: 332 NVTAGTKRSADSVXXXXXXXQVVGWPPTRAYRMNSLVHQAKSSATEVFNSE 484
+V AG KR+ADS+ QVVGWPP R YRMNS+V+QAK+SATE N E
Sbjct: 70 SVIAGIKRTADSM--AATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLE 118
>TAIR9_protein||AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor | chr1:19305670-19307130 FORWARD
Length = 268
Score = 54 bits (128), Expect = 9e-008
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +2
Query: 476 NSEKGECQITSGKGNIGGQENNANAK-EGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYE 652
+S+ G TS + Q+ +A AK + +FVK+NM G PIGRKV+L+AH+SYE
Sbjct: 115 SSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYE 174
Query: 653 ALAQTLEDMFQG 688
L+ T++ +F+G
Sbjct: 175 QLSFTVDKLFRG 186
>TAIR9_protein||AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1
(PHYTOCHROME-ASSOCIATED PROTEIN 1); transcription factor |
chr3:5612801-5614208 REVERSE
Length = 270
Score = 54 bits (127), Expect = 1e-007
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +2
Query: 524 GGQENNAN--AKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDMFQGPSA 697
GGQ N ++ K+ +FVK+NMDG PIGRKV+L A++SYE L+ ++ +F+G A
Sbjct: 132 GGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLA 191
Query: 698 NAKLIRSG 721
+ I G
Sbjct: 192 AQRDISDG 199
>TAIR9_protein||AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor | chr5:9033480-9034554 FORWARD
Length = 176
Score = 50 bits (118), Expect = 1e-006
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 500 ITSGKGNIGGQENNANAKEGGRLTSSLFVKVNMDGSPIGRKVNLTAHSSYEALAQTLEDM 679
+ S + N+ Q K+ L+VK+NM+G PIGRKVNL+A+++Y+ L+ ++ +
Sbjct: 55 VRSSRRNLTAQLKEEMKKKESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQL 114
Query: 680 F 682
F
Sbjct: 115 F 115
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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