BLASTX 7.6.2
Query= RU00244 /QuerySize=352
(351 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|149234133|ref|XP_980636.2| PREDICTED: hypothetical protein [M... 82 1e-014
gi|149234175|ref|XP_001472612.1| PREDICTED: hypothetical protein... 82 1e-014
gi|196005677|ref|XP_002112705.1| predicted protein [Trichoplax a... 72 1e-011
gi|126338298|ref|XP_001373502.1| PREDICTED: hypothetical protein... 71 2e-011
gi|66815685|ref|XP_641859.1| hypothetical protein [Dictyostelium... 71 2e-011
>gi|149234133|ref|XP_980636.2| PREDICTED: hypothetical protein [Mus musculus]
Length = 137
Score = 82 bits (200), Expect = 1e-014
Identities = 43/89 (48%), Gaps = 14/89 (15%)
Frame = +3
Query: 24 CFCGDC*FCG--GGGGGGGGCRFSCV*GGGCGGCGLCSSGCGCNWCGNG*ACSCCGR*SG 197
C CG C CG GG GG GGC GGCGGCG C GC CG CS CG G
Sbjct: 3 CGCGGCGGCGGCGGCGGCGGC-------GGCGGCGGCGGCGGCGGCGGCGGCSGCGGCGG 55
Query: 198 CSRC*NGCCDCCS----GGGGGACICKNC 272
C C GC CC GG GG C C C
Sbjct: 56 CGGC-GGCSSCCGGCGCGGCGGCCGCCGC 83
>gi|149234175|ref|XP_001472612.1| PREDICTED: hypothetical protein [Mus
musculus]
Length = 205
Score = 82 bits (200), Expect = 1e-014
Identities = 43/89 (48%), Gaps = 14/89 (15%)
Frame = +3
Query: 24 CFCGDC*FCG--GGGGGGGGCRFSCV*GGGCGGCGLCSSGCGCNWCGNG*ACSCCGR*SG 197
C CG C CG GG GG GGC GGCGGCG C GC CG CS CG G
Sbjct: 3 CGCGGCGGCGGCGGCGGCGGC-------GGCGGCGGCGGCGGCGGCGGCGGCSGCGGCGG 55
Query: 198 CSRC*NGCCDCCS----GGGGGACICKNC 272
C C GC CC GG GG C C C
Sbjct: 56 CGGC-GGCSSCCGGCGCGGCGGCCGCCGC 83
>gi|196005677|ref|XP_002112705.1| predicted protein [Trichoplax adhaerens]
Length = 383
Score = 72 bits (174), Expect = 1e-011
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -3
Query: 277 ERQFLQMHAPPPPPLQQSQQPFQQRLQPLQRPQQLQAQPFPHQLQPQPLEQRPQPP-QPP 101
++Q LQ + PPLQQ QQP Q++ Q+ QQ Q P Q P++Q+ QPP QPP
Sbjct: 193 QQQQLQQQSVQQPPLQQQQQPVFQQVHIQQQQQQPMQQQQPPVQQQVPIQQQQQPPIQPP 252
Query: 100 PQTQEKRQPPPPPPPPPQNQQSPQKQQQQQ 11
Q Q +Q PP P Q QQ Q+QQQQQ
Sbjct: 253 IQQQPIQQQPPLQQQPMQQQQLQQQQQQQQ 282
>gi|126338298|ref|XP_001373502.1| PREDICTED: hypothetical protein [Monodelphis
domestica]
Length = 125
Score = 71 bits (173), Expect = 2e-011
Identities = 35/75 (46%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +3
Query: 39 C*FCGGGGGGGGGCRFSCV*GGGCGGCGLCSSGCGCNWCGNG*ACSCCGR*SGCSR--C* 212
C CGG GGG GGC C GGC GCG C GC CG C C C R C
Sbjct: 3 CCGCGGCGGGCGGCGGGC---GGCSGCGGCGGCGGCGGCGGCGGCGGCCTTCTCRRVGCC 59
Query: 213 NGCCDCCSGGGGGAC 257
+ CC CC G GG C
Sbjct: 60 SACCPCCCGCCGGCC 74
>gi|66815685|ref|XP_641859.1| hypothetical protein [Dictyostelium discoideum
AX4]
Length = 1333
Score = 71 bits (172), Expect = 2e-011
Identities = 42/103 (40%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Frame = -3
Query: 319 FDSPPPSSGSTQLFERQFLQMHAPPPPPLQQSQQPFQQRLQPLQRPQQLQAQPFPHQLQP 140
+ PP Q ++Q Q P P QQ QQ QQ+ Q Q+PQQ Q Q Q Q
Sbjct: 674 YSQPPQQQQQQQQQQQQQQQQQQQPQPQQQQQQQQQQQQQQQQQQPQQPQQQ--QQQQQQ 731
Query: 139 QPLEQRPQPPQPPPQTQEKRQPPPPPPPPPQNQQSPQKQQQQQ 11
Q +Q+ QP Q Q Q K+Q P P Q QQ Q+QQQQQ
Sbjct: 732 QQQQQQQQPQQQQQQPQRKQQQPKQPQQQQQQQQQQQQQQQQQ 774
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,672,549,393
Number of Sequences: 7387702
Number of Extensions: 6672549393
Number of Successful Extensions: 8019734
Number of sequences better than 0.0: 0
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