BLASTX 7.6.2
Query= RU00366 /QuerySize=740
(739 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157348182|emb|CAO22892.1| unnamed protein product [Vitis vini... 253 2e-065
gi|75219204|sp|O23208.2|ATB40_ARATH RecName: Full=Homeobox-leuci... 231 5e-059
gi|145354375|ref|NP_195392.2| ATHB40/HB-5 (ARABIDOPSIS THALIANA ... 229 2e-058
gi|15224190|ref|NP_179445.1| ATHB21/HB-2 (homeobox-2); DNA bindi... 201 4e-050
gi|15240052|ref|NP_201471.1| HB53 (homeobox-8); DNA binding / tr... 190 1e-046
>gi|157348182|emb|CAO22892.1| unnamed protein product [Vitis vinifera]
Length = 207
Score = 253 bits (644), Expect = 2e-065
Identities = 129/182 (70%), Positives = 154/182 (84%), Gaps = 3/182 (1%)
Frame = +3
Query: 6 QVPPQGAATKPRRRRKKSKSGEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRLA 185
Q P+ K RRRRKKSK GE+ A+KRKL+EEQVT LELNFGNEHKLESE+KD++A
Sbjct: 22 QAMPEQGEAKVRRRRKKSK-GESSSGCARKRKLSEEQVTHLELNFGNEHKLESERKDKIA 80
Query: 186 SELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSE 365
SELGLDPRQVAVWFQNRRARWK+KKLEEE+S LK HE+VV+EKC+LE+E+ LKEQLS+
Sbjct: 81 SELGLDPRQVAVWFQNRRARWKSKKLEEEFSKLKIVHESVVVEKCRLETEVLTLKEQLSD 140
Query: 366 AEKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFG-VEEYDGVFYMPQNNYINGM 542
AEKEI RLSER++ G SSNSP+SSLS ++DPPFFGEFG V+ D VFY+P+NNY++GM
Sbjct: 141 AEKEIRRLSERSD-GVSSNSPTSSLSNAVDVDPPFFGEFGVVDGLDNVFYIPENNYVSGM 199
Query: 543 EW 548
EW
Sbjct: 200 EW 201
>gi|75219204|sp|O23208.2|ATB40_ARATH RecName: Full=Homeobox-leucine zipper
protein ATHB-40; AltName: Full=Homeodomain transcription factor
ATHB-40; AltName: Full=HD-ZIP protein ATHB-40
Length = 217
Score = 231 bits (588), Expect = 5e-059
Identities = 116/192 (60%), Positives = 155/192 (80%), Gaps = 10/192 (5%)
Frame = +3
Query: 15 PQGAATKPRRRRKKSK----SGEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRL 182
P G +P+RRRKK+K S + G +KRKLT+EQV +LE++FG+EHKLESE+KDRL
Sbjct: 27 PVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRL 86
Query: 183 ASELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLS 362
A+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK H+NVV++KC+LESE+ +LKEQL
Sbjct: 87 AAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLY 146
Query: 363 EAEKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGV----EEYDGVFY-MPQNN 527
+AE+EI RL+ER EGG S++ SSS+S+EAN + PFFG++ V ++YD +FY +P+N+
Sbjct: 147 DAEREIQRLAERVEGGSSNSPISSSVSVEAN-ETPFFGDYKVGDDGDDYDHLFYPVPENS 205
Query: 528 YINGMEWMNQYM 563
YI+ EWM+ Y+
Sbjct: 206 YIDEAEWMSLYI 217
>gi|145354375|ref|NP_195392.2| ATHB40/HB-5 (ARABIDOPSIS THALIANA HOMEOBOX
PROTEIN 40); DNA binding / transcription factor [Arabidopsis thaliana]
Length = 216
Score = 229 bits (583), Expect = 2e-058
Identities = 115/190 (60%), Positives = 154/190 (81%), Gaps = 10/190 (5%)
Frame = +3
Query: 21 GAATKPRRRRKKSK----SGEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRLAS 188
G +P+RRRKK+K S + G +KRKLT+EQV +LE++FG+EHKLESE+KDRLA+
Sbjct: 28 GEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAA 87
Query: 189 ELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSEA 368
ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK H+NVV++KC+LESE+ +LKEQL +A
Sbjct: 88 ELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDA 147
Query: 369 EKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGV----EEYDGVFY-MPQNNYI 533
E+EI RL+ER EGG S++ SSS+S+EAN + PFFG++ V ++YD +FY +P+N+YI
Sbjct: 148 EREIQRLAERVEGGSSNSPISSSVSVEAN-ETPFFGDYKVGDDGDDYDHLFYPVPENSYI 206
Query: 534 NGMEWMNQYM 563
+ EWM+ Y+
Sbjct: 207 DEAEWMSLYI 216
>gi|15224190|ref|NP_179445.1| ATHB21/HB-2 (homeobox-2); DNA binding /
transcription factor [Arabidopsis thaliana]
Length = 220
Score = 201 bits (511), Expect = 4e-050
Identities = 106/190 (55%), Positives = 145/190 (76%), Gaps = 13/190 (6%)
Frame = +3
Query: 27 ATKPRRRRKKSKS------GEAGGAG-AKKRKLTEEQVTLLELNFGNEHKLESEKKDRLA 185
A RRR++KSKS GE G G +KRKL++EQV +LE++F ++HKLESE+KDRLA
Sbjct: 33 AKPTRRRKRKSKSVVVAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLA 92
Query: 186 SELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSE 365
SELGLDPRQVAVWFQNRRARWKNK++E+EY+ LK +E V+EKC+L+SE+ LKEQL E
Sbjct: 93 SELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYE 152
Query: 366 AEKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGV----EEYDGVFYMPQNNYI 533
AE+EI RL++R EG S++ SSS+++EAN PFFG++ + E + + Y P +YI
Sbjct: 153 AEREIQRLAKRVEGTLSNSPISSSVTIEANHTTPFFGDYDIGFDGEADENLLYSP--DYI 210
Query: 534 NGMEWMNQYM 563
+G++WM+Q+M
Sbjct: 211 DGLDWMSQFM 220
>gi|15240052|ref|NP_201471.1| HB53 (homeobox-8); DNA binding / transcription
factor [Arabidopsis thaliana]
Length = 228
Score = 190 bits (482), Expect = 1e-046
Identities = 105/177 (59%), Positives = 127/177 (71%), Gaps = 9/177 (5%)
Frame = +3
Query: 39 RRRRKKSKS-------GEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRLASELG 197
R+RR K S E GG +KRKLT+EQV +LE +FGNEHKLES +K+++A ELG
Sbjct: 48 RKRRSKGSSATNEEDVAEIGGM-LRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELG 106
Query: 198 LDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSEAEKE 377
LDPRQVAVWFQNRRARWKNKKLEEEY+ LK H+NVVL +C+LES++ KL EQLSEA+ E
Sbjct: 107 LDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSE 166
Query: 378 IHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGVEEYDGVFYMPQNNYINGMEW 548
I +LSER E +NS SSSLS+EAN P F Y+ FYM NNY+ ME+
Sbjct: 167 IRKLSERLE-EMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSMEY 222
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,360,824,904
Number of Sequences: 7387702
Number of Extensions: 13360824904
Number of Successful Extensions: 15855185
Number of sequences better than 0.0: 0
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