BLASTX 7.6.2 Query= RU00366 /QuerySize=740 (739 letters) Database: GenBank nr; 7,387,702 sequences; 2,551,671,255 total letters Score E Sequences producing significant alignments: (bits) Value gi|157348182|emb|CAO22892.1| unnamed protein product [Vitis vini... 253 2e-065 gi|75219204|sp|O23208.2|ATB40_ARATH RecName: Full=Homeobox-leuci... 231 5e-059 gi|145354375|ref|NP_195392.2| ATHB40/HB-5 (ARABIDOPSIS THALIANA ... 229 2e-058 gi|15224190|ref|NP_179445.1| ATHB21/HB-2 (homeobox-2); DNA bindi... 201 4e-050 gi|15240052|ref|NP_201471.1| HB53 (homeobox-8); DNA binding / tr... 190 1e-046 >gi|157348182|emb|CAO22892.1| unnamed protein product [Vitis vinifera] Length = 207 Score = 253 bits (644), Expect = 2e-065 Identities = 129/182 (70%), Positives = 154/182 (84%), Gaps = 3/182 (1%) Frame = +3 Query: 6 QVPPQGAATKPRRRRKKSKSGEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRLA 185 Q P+ K RRRRKKSK GE+ A+KRKL+EEQVT LELNFGNEHKLESE+KD++A Sbjct: 22 QAMPEQGEAKVRRRRKKSK-GESSSGCARKRKLSEEQVTHLELNFGNEHKLESERKDKIA 80 Query: 186 SELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSE 365 SELGLDPRQVAVWFQNRRARWK+KKLEEE+S LK HE+VV+EKC+LE+E+ LKEQLS+ Sbjct: 81 SELGLDPRQVAVWFQNRRARWKSKKLEEEFSKLKIVHESVVVEKCRLETEVLTLKEQLSD 140 Query: 366 AEKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFG-VEEYDGVFYMPQNNYINGM 542 AEKEI RLSER++ G SSNSP+SSLS ++DPPFFGEFG V+ D VFY+P+NNY++GM Sbjct: 141 AEKEIRRLSERSD-GVSSNSPTSSLSNAVDVDPPFFGEFGVVDGLDNVFYIPENNYVSGM 199 Query: 543 EW 548 EW Sbjct: 200 EW 201 >gi|75219204|sp|O23208.2|ATB40_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-40; AltName: Full=Homeodomain transcription factor ATHB-40; AltName: Full=HD-ZIP protein ATHB-40 Length = 217 Score = 231 bits (588), Expect = 5e-059 Identities = 116/192 (60%), Positives = 155/192 (80%), Gaps = 10/192 (5%) Frame = +3 Query: 15 PQGAATKPRRRRKKSK----SGEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRL 182 P G +P+RRRKK+K S + G +KRKLT+EQV +LE++FG+EHKLESE+KDRL Sbjct: 27 PVGEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRL 86 Query: 183 ASELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLS 362 A+ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK H+NVV++KC+LESE+ +LKEQL Sbjct: 87 AAELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLY 146 Query: 363 EAEKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGV----EEYDGVFY-MPQNN 527 +AE+EI RL+ER EGG S++ SSS+S+EAN + PFFG++ V ++YD +FY +P+N+ Sbjct: 147 DAEREIQRLAERVEGGSSNSPISSSVSVEAN-ETPFFGDYKVGDDGDDYDHLFYPVPENS 205 Query: 528 YINGMEWMNQYM 563 YI+ EWM+ Y+ Sbjct: 206 YIDEAEWMSLYI 217 >gi|145354375|ref|NP_195392.2| ATHB40/HB-5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor [Arabidopsis thaliana] Length = 216 Score = 229 bits (583), Expect = 2e-058 Identities = 115/190 (60%), Positives = 154/190 (81%), Gaps = 10/190 (5%) Frame = +3 Query: 21 GAATKPRRRRKKSK----SGEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRLAS 188 G +P+RRRKK+K S + G +KRKLT+EQV +LE++FG+EHKLESE+KDRLA+ Sbjct: 28 GEVKQPKRRRKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAA 87 Query: 189 ELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSEA 368 ELGLDPRQVAVWFQNRRARWKNK+LEEEY+ LK H+NVV++KC+LESE+ +LKEQL +A Sbjct: 88 ELGLDPRQVAVWFQNRRARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDA 147 Query: 369 EKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGV----EEYDGVFY-MPQNNYI 533 E+EI RL+ER EGG S++ SSS+S+EAN + PFFG++ V ++YD +FY +P+N+YI Sbjct: 148 EREIQRLAERVEGGSSNSPISSSVSVEAN-ETPFFGDYKVGDDGDDYDHLFYPVPENSYI 206 Query: 534 NGMEWMNQYM 563 + EWM+ Y+ Sbjct: 207 DEAEWMSLYI 216 >gi|15224190|ref|NP_179445.1| ATHB21/HB-2 (homeobox-2); DNA binding / transcription factor [Arabidopsis thaliana] Length = 220 Score = 201 bits (511), Expect = 4e-050 Identities = 106/190 (55%), Positives = 145/190 (76%), Gaps = 13/190 (6%) Frame = +3 Query: 27 ATKPRRRRKKSKS------GEAGGAG-AKKRKLTEEQVTLLELNFGNEHKLESEKKDRLA 185 A RRR++KSKS GE G G +KRKL++EQV +LE++F ++HKLESE+KDRLA Sbjct: 33 AKPTRRRKRKSKSVVVAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLA 92 Query: 186 SELGLDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSE 365 SELGLDPRQVAVWFQNRRARWKNK++E+EY+ LK +E V+EKC+L+SE+ LKEQL E Sbjct: 93 SELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYE 152 Query: 366 AEKEIHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGV----EEYDGVFYMPQNNYI 533 AE+EI RL++R EG S++ SSS+++EAN PFFG++ + E + + Y P +YI Sbjct: 153 AEREIQRLAKRVEGTLSNSPISSSVTIEANHTTPFFGDYDIGFDGEADENLLYSP--DYI 210 Query: 534 NGMEWMNQYM 563 +G++WM+Q+M Sbjct: 211 DGLDWMSQFM 220 >gi|15240052|ref|NP_201471.1| HB53 (homeobox-8); DNA binding / transcription factor [Arabidopsis thaliana] Length = 228 Score = 190 bits (482), Expect = 1e-046 Identities = 105/177 (59%), Positives = 127/177 (71%), Gaps = 9/177 (5%) Frame = +3 Query: 39 RRRRKKSKS-------GEAGGAGAKKRKLTEEQVTLLELNFGNEHKLESEKKDRLASELG 197 R+RR K S E GG +KRKLT+EQV +LE +FGNEHKLES +K+++A ELG Sbjct: 48 RKRRSKGSSATNEEDVAEIGGM-LRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELG 106 Query: 198 LDPRQVAVWFQNRRARWKNKKLEEEYSILKKDHENVVLEKCKLESEMEKLKEQLSEAEKE 377 LDPRQVAVWFQNRRARWKNKKLEEEY+ LK H+NVVL +C+LES++ KL EQLSEA+ E Sbjct: 107 LDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSE 166 Query: 378 IHRLSERAEGGGSSNSPSSSLSMEANIDPPFFGEFGVEEYDGVFYMPQNNYINGMEW 548 I +LSER E +NS SSSLS+EAN P F Y+ FYM NNY+ ME+ Sbjct: 167 IRKLSERLE-EMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSMEY 222 Database: GenBank nr Posted date: Wed Dec 03 02:04:20 2008 Number of letters in database: 2,551,671,255 Number of sequences in database: 7,387,702 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,360,824,904 Number of Sequences: 7387702 Number of Extensions: 13360824904 Number of Successful Extensions: 15855185 Number of sequences better than 0.0: 0 |