BLASTX 7.6.2
Query= RU00438 /QuerySize=580
(579 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147866118|emb|CAN78824.1| hypothetical protein [Vitis vinifera] 220 5e-056
gi|171452362|dbj|BAG15872.1| transcription factor [Bruguiera gym... 180 8e-044
gi|147791077|emb|CAN68018.1| hypothetical protein [Vitis vinifera] 174 4e-042
gi|113129056|gb|ABI30334.1| Cys-3-His zinc finger protein [Capsi... 158 4e-037
gi|75289300|sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CC... 110 7e-023
>gi|147866118|emb|CAN78824.1| hypothetical protein [Vitis vinifera]
Length = 893
Score = 220 bits (560), Expect = 5e-056
Identities = 127/193 (65%), Positives = 147/193 (76%), Gaps = 16/193 (8%)
Frame = -1
Query: 573 IQMRQNMNMQLRSSYSSSPASSPVRGSPLHGFDASGA--AAVLSSRSAAFAKQRSQSFIE 400
IQMRQN+N QLRSSY +S +SSPVRGS G D SG+ AAVL+SR+AAFAK RSQSFIE
Sbjct: 706 IQMRQNINQQLRSSYPASLSSSPVRGSASFGMDPSGSATAAVLNSRAAAFAK-RSQSFIE 764
Query: 399 RS-ANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQGEELNKLRKSASFGYRNNGN- 226
RS AN + GFSS A S S LS+WGSP GKLDWGIQGEELNKLRKSASFG+R+NG+
Sbjct: 765 RSAANRHSGFSSSASSAAVVPSPLSDWGSPDGKLDWGIQGEELNKLRKSASFGFRSNGSS 824
Query: 225 ------SVP-TVDEPDVSWVNTLVKDAPGPSRPGPLGFEDQQQQQQCHLDNGDSEILPAW 67
SVP DEPDVSWV +LVK+AP +RPG G+E+Q Q HL++G SEILP W
Sbjct: 825 YAAQAASVPAAADEPDVSWVQSLVKEAPS-ARPGQFGYEEQHQY---HLNSGGSEILPPW 880
Query: 66 VEQMYLEQEQMVA 28
VEQ+ +EQEQMVA
Sbjct: 881 VEQLCVEQEQMVA 893
>gi|171452362|dbj|BAG15872.1| transcription factor [Bruguiera gymnorhiza]
Length = 661
Score = 180 bits (455), Expect = 8e-044
Identities = 109/192 (56%), Positives = 135/192 (70%), Gaps = 20/192 (10%)
Frame = -1
Query: 576 GIQMRQNMNMQLRSSYSSSPASSPVRGSPLHGFDASG--AAAVLSSRSAAFAKQRSQSFI 403
G+Q+RQNMN QLRSSY SS +SSPVR +G D+S AAAV++SRS+AFAK RSQSFI
Sbjct: 479 GLQIRQNMN-QLRSSYPSSLSSSPVRKPASYGVDSSAAVAAAVMNSRSSAFAK-RSQSFI 536
Query: 402 ER-SANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQGEELNKLRKSASFGYRNNGN 226
+R +A G ++ A+S + +SNLS+W SP GKLDWGIQG+ELNKL++S+SFG R+N N
Sbjct: 537 DRGAATSRLGLTAAANSVSLMSSNLSDWSSPHGKLDWGIQGDELNKLKRSSSFGIRSNSN 596
Query: 225 SVPTVD-------EPDVSWVNTLVKDAPGPSRPGPLGFEDQQQQQQCHLDNGDSEILPAW 67
V D EPDVSWVN+LVKD PS PG G E +Q +L G E +P W
Sbjct: 597 PVTKTDFMQSNSNEPDVSWVNSLVKDV--PSVPG-FGAE-----KQYNLSKGVRESIPTW 648
Query: 66 VEQMYLEQEQMV 31
EQ+YLEQEQMV
Sbjct: 649 TEQLYLEQEQMV 660
>gi|147791077|emb|CAN68018.1| hypothetical protein [Vitis vinifera]
Length = 674
Score = 174 bits (440), Expect = 4e-042
Identities = 106/191 (55%), Positives = 131/191 (68%), Gaps = 21/191 (10%)
Frame = -1
Query: 567 MRQNMNMQLRSSY--SSSPASSPVRGSPLHGFDASG--AAAVLSSRSAAFAKQRSQSFIE 400
MRQNMN Q R+SY ++ SSPVR + +GFD+S AAAV++SRS+AFAK RSQSFI+
Sbjct: 492 MRQNMNQQ-RASYPTKTTVTSSPVRKTSSYGFDSSAAVAAAVMNSRSSAFAK-RSQSFID 549
Query: 399 RS--ANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQGEELNKLRKSASFGYRNNGN 226
R ++ + GF++ ++S T +SNLS+W SP GKLDWGIQG+ELNKL+KSASFG+R N
Sbjct: 550 RGGMSHRSPGFTAASNSATLMSSNLSDWSSPDGKLDWGIQGDELNKLKKSASFGFRTNNT 609
Query: 225 SVPT------VDEPDVSWVNTLVKDAPGPSRPGPLGFEDQQQQQQCHLDNGDSEILPAWV 64
+ T DEPDVSWVN+LVKD P S G G QQ G E LP WV
Sbjct: 610 ATATQSMMASTDEPDVSWVNSLVKDVPAVS-SGLFG------SQQRPYGIGVHEKLPPWV 662
Query: 63 EQMYLEQEQMV 31
EQMY+EQEQMV
Sbjct: 663 EQMYIEQEQMV 673
>gi|113129056|gb|ABI30334.1| Cys-3-His zinc finger protein [Capsicum annuum]
Length = 687
Score = 158 bits (397), Expect = 4e-037
Identities = 101/192 (52%), Positives = 118/192 (61%), Gaps = 26/192 (13%)
Frame = -1
Query: 576 GIQMRQNMNMQLRSSYSSSPASSPVRGSPLHGFDASGAAAVL--SSRSAAFAKQRSQSFI 403
G+QMRQNMN Q +SYSS +S R S +G DAS AAA SSRSAAFAK RSQSFI
Sbjct: 511 GMQMRQNMNQQHMTSYSSGQSSPSFRTSSSYGIDASIAAATAASSSRSAAFAK-RSQSFI 569
Query: 402 ERSANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQGEELNKLRKSASFGYRNNGNS 223
+RSA + + SNLS WGSP GKLDWGIQ +ELNKLRKSASFG RN+GN
Sbjct: 570 DRSA------VGRLSNASAMPSNLSGWGSPDGKLDWGIQKDELNKLRKSASFGLRNSGNR 623
Query: 222 VPTVD--------EPDVSWVNTLVKDAPGPSRPGPLGFEDQQQQQQCHLDNGDSEILPAW 67
PT + E DVSWV L D+P L EDQQ + + SE P W
Sbjct: 624 FPTNEGSVSDSSVESDVSWVQPL--DSPARQ----LAMEDQQYRLNA---SRGSEATPTW 674
Query: 66 VEQMYLEQEQMV 31
V+Q+Y+EQEQ+V
Sbjct: 675 VDQLYMEQEQIV 686
>gi|75289300|sp|Q688R3.1|C3H33_ORYSJ RecName: Full=Zinc finger CCCH
domain-containing protein 33; Short=OsC3H33
Length = 601
Score = 110 bits (274), Expect = 7e-023
Identities = 68/125 (54%), Positives = 84/125 (67%), Gaps = 12/125 (9%)
Frame = -1
Query: 519 PASSPVRG-SPLHGFDASGAAAVLSSRSAAFAKQRSQSFIERS--ANHNYGFSSPADSGT 349
P S V G + G D S A A++SSR++AFAK RSQSFI+R A SPA +G
Sbjct: 462 PTSPMVGGANTAFGLDHSMAKAIMSSRASAFAK-RSQSFIDRGGRAPAARSLMSPATTGA 520
Query: 348 PKASNLSNWGSPSGKLDWGIQGEELNKLRKSASFGYRNNGNSVPTVD-----EPDVSWVN 184
P S LS+WGSP GKLDWG+QG+EL+KLRKSASF +R +++P EPDVSWVN
Sbjct: 521 P--SILSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQ-SAMPVATHAAAAEPDVSWVN 577
Query: 183 TLVKD 169
+LVKD
Sbjct: 578 SLVKD 582
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,360,824,904
Number of Sequences: 7387702
Number of Extensions: 13360824904
Number of Successful Extensions: 15855185
Number of sequences better than 0.0: 0
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