BLASTX 7.6.2
Query= RU00546 /QuerySize=223
(222 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|71534936|gb|AAZ32872.1| putative chromodomain-helicase-DNA-bi... 134 2e-030
gi|157346759|emb|CAO16828.1| unnamed protein product [Vitis vini... 131 2e-029
gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana] 129 1e-028
gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-bin... 129 1e-028
gi|125559479|gb|EAZ05015.1| hypothetical protein OsI_026247 [Ory... 127 3e-028
>gi|71534936|gb|AAZ32872.1| putative chromodomain-helicase-DNA-binding protein
[Medicago sativa]
Length = 171
Score = 134 bits (337), Expect = 2e-030
Identities = 64/73 (87%), Positives = 67/73 (91%), Gaps = 1/73 (1%)
Frame = +3
Query: 3 MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSS 182
MSPLQKQYYKWILERNF +LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDS
Sbjct: 47 MSPLQKQYYKWILERNFRDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSE 106
Query: 183 SKDGSKLGEEVKF 221
S D SKL E++ F
Sbjct: 107 SSDSSKL-EKIVF 118
>gi|157346759|emb|CAO16828.1| unnamed protein product [Vitis vinifera]
Length = 1719
Score = 131 bits (328), Expect = 2e-029
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +3
Query: 3 MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSS 182
MSPLQKQYYKWILERNFH+LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGG+ S
Sbjct: 847 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGNRS 906
Query: 183 SKDGSKL 203
+ D KL
Sbjct: 907 TNDCGKL 913
>gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
Length = 1221
Score = 129 bits (322), Expect = 1e-028
Identities = 61/67 (91%), Positives = 63/67 (94%), Gaps = 2/67 (2%)
Frame = +3
Query: 3 MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSS 182
MSPLQKQYYKWILERNFH+LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD +
Sbjct: 867 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDIN 926
Query: 183 SKDGSKL 203
D SKL
Sbjct: 927 --DNSKL 931
>gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein
[Arabidopsis thaliana]
Length = 1738
Score = 129 bits (322), Expect = 1e-028
Identities = 61/67 (91%), Positives = 63/67 (94%), Gaps = 2/67 (2%)
Frame = +3
Query: 3 MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSS 182
MSPLQKQYYKWILERNFH+LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGD +
Sbjct: 881 MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDIN 940
Query: 183 SKDGSKL 203
D SKL
Sbjct: 941 --DNSKL 945
>gi|125559479|gb|EAZ05015.1| hypothetical protein OsI_026247 [Oryza sativa
(indica cultivar-group)]
Length = 1700
Score = 127 bits (318), Expect = 3e-028
Identities = 58/59 (98%)
Frame = +3
Query: 3 MSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDS 179
MSPLQKQYYKWILERNF NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDS
Sbjct: 839 MSPLQKQYYKWILERNFQNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDS 897
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,360,824,904
Number of Sequences: 7387702
Number of Extensions: 13360824904
Number of Successful Extensions: 15855185
Number of sequences better than 0.0: 0
|