BLASTX 7.6.2
Query= RU00643 /QuerySize=709
(708 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1370287|emb|CAA97910.1| core protein [Pisum sativum] 228 3e-058
gi|115461693|ref|NP_001054446.1| Os05g0111200 [Oryza sativa (jap... 222 3e-056
gi|60279270|emb|CAA63967.1| pom14 [Solanum tuberosum] 218 5e-055
gi|118486782|gb|ABK95226.1| unknown [Populus trichocarpa] 215 3e-054
gi|157337309|emb|CAO21655.1| unnamed protein product [Vitis vini... 208 4e-052
>gi|1370287|emb|CAA97910.1| core protein [Pisum sativum]
Length = 146
Score = 228 bits (581), Expect = 3e-058
Identities = 107/145 (73%), Positives = 126/145 (86%)
Frame = +1
Query: 85 MPSSGFSGTLSGPKVEVAIDMGNPLLNVTVDGFLKIGAVAATRVAAEEAYHAVKKGSVSS 264
MP S FSG+LS PK++V IDMGNP LN+TVDGFLKIGAVAATR AE+ +H ++KGS+SS
Sbjct: 1 MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60
Query: 265 HNFEHTLKKMCKEGAYWGTVAGVYVGAEYGVERIRGRRDWKNAMIGGVVTGAVISAATSK 444
++FE +LKKMCKEGAYWG +AGVYVG EYGVERIRG RDWKNAM GG VTGA++SAA++
Sbjct: 61 NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120
Query: 445 DKDRIVVDAITGGAIATAAEFLNYL 519
KD+I VDAITG AIATAAEF+NYL
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYL 145
>gi|115461693|ref|NP_001054446.1| Os05g0111200 [Oryza sativa (japonica
cultivar-group)]
Length = 146
Score = 222 bits (564), Expect = 3e-056
Identities = 103/145 (71%), Positives = 122/145 (84%)
Frame = +1
Query: 85 MPSSGFSGTLSGPKVEVAIDMGNPLLNVTVDGFLKIGAVAATRVAAEEAYHAVKKGSVSS 264
MP GFSG++S P+++VAIDMGNP LN TVDGFLKIGAV A +VAAE+ + + +G VS
Sbjct: 1 MPRGGFSGSISSPRIDVAIDMGNPFLNRTVDGFLKIGAVGACKVAAEDTFDCLHRGDVSK 60
Query: 265 HNFEHTLKKMCKEGAYWGTVAGVYVGAEYGVERIRGRRDWKNAMIGGVVTGAVISAATSK 444
H EH LKKMCKEGAYWGTVAGVYVG EYGVERIRGR DWKNAMIGG ++GA+ISAA++
Sbjct: 61 HKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDWKNAMIGGALSGALISAASNN 120
Query: 445 DKDRIVVDAITGGAIATAAEFLNYL 519
KD+I+ DAITGGA+ATA EF+NYL
Sbjct: 121 HKDKIIKDAITGGAVATAVEFINYL 145
>gi|60279270|emb|CAA63967.1| pom14 [Solanum tuberosum]
Length = 146
Score = 218 bits (553), Expect = 5e-055
Identities = 105/145 (72%), Positives = 120/145 (82%)
Frame = +1
Query: 85 MPSSGFSGTLSGPKVEVAIDMGNPLLNVTVDGFLKIGAVAATRVAAEEAYHAVKKGSVSS 264
MP S F+G+L PKV+V IDMGNP LN TVD FL IG VAAT+ AEE Y V +GSVSS
Sbjct: 1 MPRSRFAGSLISPKVDVYIDMGNPFLNHTVDAFLNIGTVAATKTVAEETYGMVTRGSVSS 60
Query: 265 HNFEHTLKKMCKEGAYWGTVAGVYVGAEYGVERIRGRRDWKNAMIGGVVTGAVISAATSK 444
HNFE +LKKMCKEGAYWGTVAGVY G EYG ERIRG DWKNAMIGG +TGA+ISAA +
Sbjct: 61 HNFEKSLKKMCKEGAYWGTVAGVYAGMEYGAERIRGTNDWKNAMIGGALTGALISAACNN 120
Query: 445 DKDRIVVDAITGGAIATAAEFLNYL 519
++D+IV+DAITGGA+ATA+EFLNYL
Sbjct: 121 NRDKIVMDAITGGAVATASEFLNYL 145
>gi|118486782|gb|ABK95226.1| unknown [Populus trichocarpa]
Length = 146
Score = 215 bits (546), Expect = 3e-054
Identities = 102/146 (69%), Positives = 120/146 (82%)
Frame = +1
Query: 85 MPSSGFSGTLSGPKVEVAIDMGNPLLNVTVDGFLKIGAVAATRVAAEEAYHAVKKGSVSS 264
MPSS F +L+ PK+ VAID GNP LNVTVDGFLKIG VAA + AE+AY+ VK G+ S
Sbjct: 1 MPSSSFGASLATPKLNVAIDTGNPFLNVTVDGFLKIGTVAAAKSLAEDAYYVVKGGNFSG 60
Query: 265 HNFEHTLKKMCKEGAYWGTVAGVYVGAEYGVERIRGRRDWKNAMIGGVVTGAVISAATSK 444
EH+LKKMCKEGAYWGTVAG+YVG EYG+ERIRG DWKNAM+GG +TGA+ISAA++K
Sbjct: 61 RKIEHSLKKMCKEGAYWGTVAGMYVGMEYGMERIRGTHDWKNAMLGGALTGALISAASNK 120
Query: 445 DKDRIVVDAITGGAIATAAEFLNYLI 522
KD +V+DAI GGAIATA+ FLNYLI
Sbjct: 121 SKDNVVIDAIAGGAIATASTFLNYLI 146
>gi|157337309|emb|CAO21655.1| unnamed protein product [Vitis vinifera]
Length = 129
Score = 208 bits (528), Expect = 4e-052
Identities = 99/127 (77%), Positives = 110/127 (86%)
Frame = +1
Query: 139 IDMGNPLLNVTVDGFLKIGAVAATRVAAEEAYHAVKKGSVSSHNFEHTLKKMCKEGAYWG 318
IDMGNP LN+TVDGFLKIG VAA R AAEEAY+ VK+GS+S H EH+LKKMCKE AYWG
Sbjct: 2 IDMGNPFLNLTVDGFLKIGTVAAARAAAEEAYYVVKRGSISRHTVEHSLKKMCKEAAYWG 61
Query: 319 TVAGVYVGAEYGVERIRGRRDWKNAMIGGVVTGAVISAATSKDKDRIVVDAITGGAIATA 498
TVAGVYVG EYG ERIRG RDWKNAM+GG +TGA+IS+A K +D+IVV AITGGAIATA
Sbjct: 62 TVAGVYVGMEYGAERIRGTRDWKNAMLGGALTGAIISSACEKGRDKIVVGAITGGAIATA 121
Query: 499 AEFLNYL 519
AEFLNYL
Sbjct: 122 AEFLNYL 128
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,962,038,352
Number of Sequences: 7387702
Number of Extensions: 19962038352
Number of Successful Extensions: 23779584
Number of sequences better than 0.0: 0
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