BLASTX 7.6.2
Query= RU00976 /QuerySize=639
(638 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157356656|emb|CAO62851.1| unnamed protein product [Vitis vini... 172 2e-041
gi|2664198|emb|CAA05995.1| GTL1 [Arabidopsis thaliana] 163 9e-039
gi|12322569|gb|AAG51283.1|AC027035_6 trihelix DNA-binding protei... 163 9e-039
gi|13786451|gb|AAK39576.1|AC025296_11 putative transcription fac... 163 1e-038
gi|110289413|gb|AAP54624.2| expressed protein [Oryza sativa (jap... 163 1e-038
>gi|157356656|emb|CAO62851.1| unnamed protein product [Vitis vinifera]
Length = 610
Score = 172 bits (435), Expect = 2e-041
Identities = 82/108 (75%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI LRSGL++RYQEAGPKGPLWEEISAGMQ+MGYKR+ KRCKEKWENINKYFKKVKESN
Sbjct: 407 ALINLRSGLDSRYQEAGPKGPLWEEISAGMQQMGYKRSAKRCKEKWENINKYFKKVKESN 466
Query: 456 KARPEDAKTCPYFHELDALYRKRVLGG-GGSSSSLGNQNIQQQPPATQ 316
K RPEDAKTCPYFH+LDALYRK++LG GS S G+ + P Q
Sbjct: 467 KKRPEDAKTCPYFHQLDALYRKKLLGSTSGSGGSGGSTYVNPNRPEEQ 514
>gi|2664198|emb|CAA05995.1| GTL1 [Arabidopsis thaliana]
Length = 594
Score = 163 bits (412), Expect = 9e-039
Identities = 81/143 (56%), Positives = 96/143 (67%), Gaps = 7/143 (4%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI LRSG+E RYQ+ PKG LWEEIS M+RMGY RN KRCKEKWENINKY+KKVKESN
Sbjct: 443 ALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESN 502
Query: 456 KARPEDAKTCPYFHELDALYRKRVLGGGGSSSSLGNQNIQQQPPATQGTVAASVPAPQTQ 277
K RP+DAKTCPYFH LD LYR +VLG GG SS+ G Q+Q P T P +
Sbjct: 503 KKRPQDAKTCPYFHRLDLLYRNKVLGSGGGSSTSGLPQDQKQSPVT-------AMKPPQE 555
Query: 276 GTVAATDQSGNKSGDHSPNLQKN 208
G V G+ S + ++++
Sbjct: 556 GLVNVQQTHGSASTEEEEPIEES 578
>gi|12322569|gb|AAG51283.1|AC027035_6 trihelix DNA-binding protein (GTL1)
[Arabidopsis thaliana]
Length = 594
Score = 163 bits (412), Expect = 9e-039
Identities = 81/143 (56%), Positives = 96/143 (67%), Gaps = 7/143 (4%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI LRSG+E RYQ+ PKG LWEEIS M+RMGY RN KRCKEKWENINKY+KKVKESN
Sbjct: 443 ALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESN 502
Query: 456 KARPEDAKTCPYFHELDALYRKRVLGGGGSSSSLGNQNIQQQPPATQGTVAASVPAPQTQ 277
K RP+DAKTCPYFH LD LYR +VLG GG SS+ G Q+Q P T P +
Sbjct: 503 KKRPQDAKTCPYFHRLDLLYRNKVLGSGGGSSTSGLPQDQKQSPVT-------AMKPPQE 555
Query: 276 GTVAATDQSGNKSGDHSPNLQKN 208
G V G+ S + ++++
Sbjct: 556 GLVNVQQTHGSASTEEEEPIEES 578
>gi|13786451|gb|AAK39576.1|AC025296_11 putative transcription factor [Oryza
sativa]
Length = 822
Score = 163 bits (411), Expect = 1e-038
Identities = 77/119 (64%), Positives = 88/119 (73%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI+LRS L+ RYQEAGPKGPLWEEISAGM+R+GY R+ KRCKEKWENINKYFKKVKESN
Sbjct: 518 ALIQLRSNLDNRYQEAGPKGPLWEEISAGMRRLGYSRSSKRCKEKWENINKYFKKVKESN 577
Query: 456 KARPEDAKTCPYFHELDALYRKRVLGGGGSSSSLGNQNIQQQPPATQGTVAASVPAPQT 280
K RPED+KTCPYFH+LDALYR + SSS+ P + V + P QT
Sbjct: 578 KKRPEDSKTCPYFHQLDALYRNKAALNSSSSSAAAAAPALPPPEHAEPAVTVAAPISQT 636
>gi|110289413|gb|AAP54624.2| expressed protein [Oryza sativa (japonica
cultivar-group)]
Length = 596
Score = 163 bits (411), Expect = 1e-038
Identities = 77/119 (64%), Positives = 88/119 (73%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI+LRS L+ RYQEAGPKGPLWEEISAGM+R+GY R+ KRCKEKWENINKYFKKVKESN
Sbjct: 292 ALIQLRSNLDNRYQEAGPKGPLWEEISAGMRRLGYSRSSKRCKEKWENINKYFKKVKESN 351
Query: 456 KARPEDAKTCPYFHELDALYRKRVLGGGGSSSSLGNQNIQQQPPATQGTVAASVPAPQT 280
K RPED+KTCPYFH+LDALYR + SSS+ P + V + P QT
Sbjct: 352 KKRPEDSKTCPYFHQLDALYRNKAALNSSSSSAAAAAPALPPPEHAEPAVTVAAPISQT 410
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
|