BLASTX 7.6.2
Query= RU01217 /QuerySize=1176
(1175 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1234900|emb|CAA63222.1| homeobox-leucine zipper protein [Glyc... 358 7e-097
gi|1149535|emb|CAA64221.1| homeobox-leucine zipper protein [Pimp... 319 3e-085
gi|166908321|gb|ABZ02298.1| HAT4 [Arabidopsis halleri] 273 3e-071
gi|166908333|gb|ABZ02304.1| HAT4 [Arabidopsis halleri] 273 3e-071
gi|166908327|gb|ABZ02301.1| HAT4 [Arabidopsis halleri] 272 4e-071
>gi|1234900|emb|CAA63222.1| homeobox-leucine zipper protein [Glycine max]
Length = 284
Score = 358 bits (917), Expect = 7e-097
Identities = 193/254 (75%), Positives = 205/254 (80%), Gaps = 22/254 (8%)
Frame = +2
Query: 8 SSSPHSGFNPQKPSWNDALASSDRNSDTCRAAARSFLRGIDVNRLPSTGDCED---VSSP 178
SSSP S NPQKPSWND + +S A SFLRGIDVNRLPS DCE+ VSSP
Sbjct: 20 SSSP-SSHNPQKPSWNDPIFTSS-------GEAGSFLRGIDVNRLPSVVDCEEEAGVSSP 71
Query: 179 NSTVSSVSGKRSEREANGEDLDLERDGSRG-MSDEEDGETSRKKLRLSKDQSAILEESFK 355
NSTVSSVSGKRSERE NGE+ D +R SRG +SDEED ETSRKKLRLSKDQS +LEESFK
Sbjct: 72 NSTVSSVSGKRSERETNGEENDTDRACSRGIISDEEDAETSRKKLRLSKDQSIVLEESFK 131
Query: 356 EHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRR 535
EHNTLNPKQKLALAKQLGLR RQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRR
Sbjct: 132 EHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRR 191
Query: 536 LQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSATIDPRAHHHH--- 706
LQKEVQELRALKLSPQFYM MTPPTTLTMCPSCERVAV PPS+ +DP HHH
Sbjct: 192 LQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVAV-----PPSSAVDPATRHHHVPP 246
Query: 707 -HPMV-PVHHPRAI 742
HP P+ H +A+
Sbjct: 247 SHPRAFPIGHGQAL 260
>gi|1149535|emb|CAA64221.1| homeobox-leucine zipper protein [Pimpinella
brachycarpa]
Length = 302
Score = 319 bits (817), Expect = 3e-085
Identities = 179/238 (75%), Positives = 191/238 (80%), Gaps = 18/238 (7%)
Frame = +2
Query: 86 DTCRAAARSFLRGIDVNRLPSTG-DCED---VSSPNSTVSSVSGKRS-EREANGEDLDLE 250
D CR RSFL+GIDVNRLP+T D E+ VSSPNST+SSVSGKRS ER NG DL
Sbjct: 61 DACRVETRSFLKGIDVNRLPATTVDMEEEAGVSSPNSTISSVSGKRSLERSENGNGDDL- 119
Query: 251 RDGSRGM--SDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQ 424
D SRG+ SDEEDG+ SRKKLRLSKDQSAILE+SFKEHNTLNPKQKLALAK+LGLRPRQ
Sbjct: 120 LDCSRGLINSDEEDGDNSRKKLRLSKDQSAILEDSFKEHNTLNPKQKLALAKRLGLRPRQ 179
Query: 425 VEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTP 604
VEVWFQNRRARTKLKQTEVDCEFLKRCCENLT+ENRRL KEVQELRALKLSPQFYMQMTP
Sbjct: 180 VEVWFQNRRARTKLKQTEVDCEFLKRCCENLTDENRRLMKEVQELRALKLSPQFYMQMTP 239
Query: 605 PTTLTMCPSCERVAVPP-NSTPPSAT--IDPRAHHHHHPMVPVHHPRAIPVAGPWAAA 769
PTTLTMCPSCERV+ PP +ST PS+T PR HH HH A PWA A
Sbjct: 240 PTTLTMCPSCERVSAPPSSSTGPSSTPVETPRPHHSGSS----HHRVAF---NPWAIA 290
>gi|166908321|gb|ABZ02298.1| HAT4 [Arabidopsis halleri]
Length = 187
Score = 273 bits (696), Expect = 3e-071
Identities = 137/176 (77%), Positives = 151/176 (85%), Gaps = 5/176 (2%)
Frame = +2
Query: 167 VSSPNSTVSSVSGKRSEREANGEDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEE 346
VSSPNSTVSS +GKRSERE D + GSRG+SD+EDG+ SRKKLRLSKDQS ILEE
Sbjct: 8 VSSPNSTVSSSTGKRSEREE-----DTDPQGSRGISDDEDGDNSRKKLRLSKDQSVILEE 62
Query: 347 SFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEE 526
+FK+H+TLNPKQK ALAKQLGLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEE
Sbjct: 63 TFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEE 122
Query: 527 NRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSATIDPRA 694
NRRLQKEV ELRALKLSPQFYM M+PPTTLTMCPSCE V+VPP + + D R+
Sbjct: 123 NRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPPPQPQAATSADHRS 178
>gi|166908333|gb|ABZ02304.1| HAT4 [Arabidopsis halleri]
Length = 184
Score = 273 bits (696), Expect = 3e-071
Identities = 137/176 (77%), Positives = 151/176 (85%), Gaps = 5/176 (2%)
Frame = +2
Query: 167 VSSPNSTVSSVSGKRSEREANGEDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEE 346
VSSPNSTVSS +GKRSERE D + GSRG+SD+EDG+ SRKKLRLSKDQS ILEE
Sbjct: 8 VSSPNSTVSSSTGKRSEREE-----DTDPQGSRGISDDEDGDNSRKKLRLSKDQSVILEE 62
Query: 347 SFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEE 526
+FK+H+TLNPKQK ALAKQLGLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEE
Sbjct: 63 TFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEE 122
Query: 527 NRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSATIDPRA 694
NRRLQKEV ELRALKLSPQFYM M+PPTTLTMCPSCE V+VPP + + D R+
Sbjct: 123 NRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPPPQPQAATSADHRS 178
>gi|166908327|gb|ABZ02301.1| HAT4 [Arabidopsis halleri]
Length = 185
Score = 272 bits (695), Expect = 4e-071
Identities = 136/176 (77%), Positives = 151/176 (85%), Gaps = 5/176 (2%)
Frame = +2
Query: 167 VSSPNSTVSSVSGKRSEREANGEDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEE 346
VSSPNST+SS +GKRSERE D + GSRG+SD+EDG+ SRKKLRLSKDQS ILEE
Sbjct: 8 VSSPNSTISSSTGKRSEREE-----DTDPQGSRGISDDEDGDNSRKKLRLSKDQSVILEE 62
Query: 347 SFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEE 526
+FK+H+TLNPKQK ALAKQLGLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEE
Sbjct: 63 TFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEE 122
Query: 527 NRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSATIDPRA 694
NRRLQKEV ELRALKLSPQFYM M+PPTTLTMCPSCE V+VPP + + D R+
Sbjct: 123 NRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPPPQPQAATSADHRS 178
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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