BLASTX 7.6.2
Query= RU01286 /QuerySize=960
(959 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30690809|ref|NP_182306.2| zinc finger (CCCH-type) family prot... 258 5e-067
gi|3738297|gb|AAC63639.1| unknown protein [Arabidopsis thaliana] 258 5e-067
gi|145331437|ref|NP_001078077.1| zinc finger (CCCH-type) family ... 258 5e-067
gi|147818474|emb|CAN74119.1| hypothetical protein [Vitis vinifera] 242 3e-062
gi|157347815|emb|CAO22402.1| unnamed protein product [Vitis vini... 242 3e-062
>gi|30690809|ref|NP_182306.2| zinc finger (CCCH-type) family protein
[Arabidopsis thaliana]
Length = 468
Score = 258 bits (659), Expect = 5e-067
Identities = 128/197 (64%), Positives = 155/197 (78%), Gaps = 8/197 (4%)
Frame = -3
Query: 951 PSSVGPSSSSPNEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPV 772
PS P+ EQAFPERPGEPECQYYL+TGDCKFG SC++HHPRDR+ PR NC+LSP+
Sbjct: 271 PSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPI 330
Query: 771 GLPLRSGVQPCMFYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVGSLLGT 595
GLPLR GVQ C FY+QNG CKFGS+CKFDHPMGT+RY+PSASSL D PVAP+PV SLLG
Sbjct: 331 GLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGA 390
Query: 594 L--APSSSSSEL----RPELISARMPSSGNPSSSSVGLIFSQS-GSVSLADVQLSSQTSV 436
L APSSSS+EL + +P+S + S+ S GLIFSQS GS+ +++QLSSQ+S+
Sbjct: 391 LAAAPSSSSTELIAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSL 450
Query: 435 PISNSRSTRQGGEVRRS 385
P++ SR TRQG E+RRS
Sbjct: 451 PLTGSRITRQGREIRRS 467
>gi|3738297|gb|AAC63639.1| unknown protein [Arabidopsis thaliana]
Length = 553
Score = 258 bits (659), Expect = 5e-067
Identities = 128/197 (64%), Positives = 155/197 (78%), Gaps = 8/197 (4%)
Frame = -3
Query: 951 PSSVGPSSSSPNEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPV 772
PS P+ EQAFPERPGEPECQYYL+TGDCKFG SC++HHPRDR+ PR NC+LSP+
Sbjct: 356 PSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPI 415
Query: 771 GLPLRSGVQPCMFYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVGSLLGT 595
GLPLR GVQ C FY+QNG CKFGS+CKFDHPMGT+RY+PSASSL D PVAP+PV SLLG
Sbjct: 416 GLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGA 475
Query: 594 L--APSSSSSEL----RPELISARMPSSGNPSSSSVGLIFSQS-GSVSLADVQLSSQTSV 436
L APSSSS+EL + +P+S + S+ S GLIFSQS GS+ +++QLSSQ+S+
Sbjct: 476 LAAAPSSSSTELIAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSL 535
Query: 435 PISNSRSTRQGGEVRRS 385
P++ SR TRQG E+RRS
Sbjct: 536 PLTGSRITRQGREIRRS 552
>gi|145331437|ref|NP_001078077.1| zinc finger (CCCH-type) family protein
[Arabidopsis thaliana]
Length = 442
Score = 258 bits (659), Expect = 5e-067
Identities = 128/197 (64%), Positives = 155/197 (78%), Gaps = 8/197 (4%)
Frame = -3
Query: 951 PSSVGPSSSSPNEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPV 772
PS P+ EQAFPERPGEPECQYYL+TGDCKFG SC++HHPRDR+ PR NC+LSP+
Sbjct: 245 PSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPI 304
Query: 771 GLPLRSGVQPCMFYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVGSLLGT 595
GLPLR GVQ C FY+QNG CKFGS+CKFDHPMGT+RY+PSASSL D PVAP+PV SLLG
Sbjct: 305 GLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGA 364
Query: 594 L--APSSSSSEL----RPELISARMPSSGNPSSSSVGLIFSQS-GSVSLADVQLSSQTSV 436
L APSSSS+EL + +P+S + S+ S GLIFSQS GS+ +++QLSSQ+S+
Sbjct: 365 LAAAPSSSSTELIAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSL 424
Query: 435 PISNSRSTRQGGEVRRS 385
P++ SR TRQG E+RRS
Sbjct: 425 PLTGSRITRQGREIRRS 441
>gi|147818474|emb|CAN74119.1| hypothetical protein [Vitis vinifera]
Length = 1388
Score = 242 bits (617), Expect = 3e-062
Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
Frame = -3
Query: 957 SVPSSVGPSSSSPNEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLS 778
S+PSS GPSSS+ EQ FPERPG+ ECQYYLRTGDCKFG SCRYHHPR+ + P+TNC+LS
Sbjct: 313 SLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLS 372
Query: 777 PVGLPLRSGVQPCMFYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVGSLL 601
P+GLPLR GVQPC FYLQNG+CKFGS+CKFDHP+G MRYSPSASSL DMPVAP+PVGS L
Sbjct: 373 PLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSL 432
Query: 600 GTLAPSSSSSELRPELISARMPSSGNPSSSSVGLIFSQSGSVSLADVQLSSQTSVPISNS 421
TLAPS SSS+LRP+ IS S + S G S S + + S + V +S
Sbjct: 433 ATLAPSFSSSDLRPDFISGSKKDSHSTRMPSSGNTTSSSVGLIFSQTGSVSLSDVQLSGQ 492
Query: 420 RS 415
S
Sbjct: 493 SS 494
>gi|157347815|emb|CAO22402.1| unnamed protein product [Vitis vinifera]
Length = 442
Score = 242 bits (617), Expect = 3e-062
Identities = 117/182 (64%), Positives = 136/182 (74%), Gaps = 1/182 (0%)
Frame = -3
Query: 957 SVPSSVGPSSSSPNEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLS 778
S+PSS GPSSS+ EQ FPERPG+ ECQYYLRTGDCKFG SCRYHHPR+ + P+TNC+LS
Sbjct: 242 SLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGSSCRYHHPREWVVPKTNCVLS 301
Query: 777 PVGLPLRSGVQPCMFYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVGSLL 601
P+GLPLR GVQPC FYLQNG+CKFGS+CKFDHP+G MRYSPSASSL DMPVAP+PVGS L
Sbjct: 302 PLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGNMRYSPSASSLTDMPVAPYPVGSSL 361
Query: 600 GTLAPSSSSSELRPELISARMPSSGNPSSSSVGLIFSQSGSVSLADVQLSSQTSVPISNS 421
TLAPS SSS+LRP+ IS S + S G S S + + S + V +S
Sbjct: 362 ATLAPSFSSSDLRPDFISGSKKDSHSTRMPSSGNTTSSSVGLIFSQTGSVSLSDVQLSGQ 421
Query: 420 RS 415
S
Sbjct: 422 SS 423
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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