BLASTX 7.6.2
Query= RU01394 /QuerySize=1086
(1085 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15240075|ref|NP_201477.1| SDH1-1 (Succinate dehydrogenase 1-1... 592 2e-167
gi|15224174|ref|NP_179435.1| SDH1-2 (Succinate dehydrogenase 1-2... 567 6e-160
gi|195647178|gb|ACG43057.1| unknown [Zea mays] 565 2e-159
gi|115470493|ref|NP_001058845.1| Os07g0134800 [Oryza sativa (jap... 565 3e-159
gi|125557151|gb|EAZ02687.1| hypothetical protein OsI_023919 [Ory... 560 9e-158
>gi|15240075|ref|NP_201477.1| SDH1-1 (Succinate dehydrogenase 1-1) [Arabidopsis
thaliana]
Length = 634
Score = 592 bits (1525), Expect = 2e-167
Identities = 287/318 (90%), Positives = 296/318 (93%)
Frame = +2
Query: 131 MWRCVSRRLGVSSSQRSIAANDCLRSHFSRLFSTESATGRSSYTVVDHTYDAVVVGAGGA 310
MWRCVSR +S+ S + S FSR FST S RSSYT+VDHTYDAVVVGAGGA
Sbjct: 1 MWRCVSRGFRAPASKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGA 60
Query: 311 GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 490
GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDW
Sbjct: 61 GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDW 120
Query: 491 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA 670
LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA
Sbjct: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA 180
Query: 671 ADRTGHALLHTLYGQAMRHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFQASS 850
ADRTGHALLHTLYGQAM+HNTQFFVEYFALDL+M SDGSCQGVIALNMEDGTLHRF++S
Sbjct: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMASDGSCQGVIALNMEDGTLHRFRSSQ 240
Query: 851 TILATGGYGRAYFSATSAHTCTGDGNGMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS 1030
TILATGGYGRAYFSATSAHTCTGDGN MVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS
Sbjct: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS 300
Query: 1031 RGEGGILRNSEGERFMER 1084
RGEGGILRNSEGERFMER
Sbjct: 301 RGEGGILRNSEGERFMER 318
>gi|15224174|ref|NP_179435.1| SDH1-2 (Succinate dehydrogenase 1-2) [Arabidopsis
thaliana]
Length = 632
Score = 567 bits (1461), Expect = 6e-160
Identities = 275/308 (89%), Positives = 289/308 (93%), Gaps = 1/308 (0%)
Frame = +2
Query: 164 SSSQRSIAANDCLRSHFSRLFSTESATG-RSSYTVVDHTYDAVVVGAGGAGLRAAIGLSE 340
SSS+RS + + S SR FS + G +SSYT+VDHTYDAVVVGAGGAGLRAAIGLSE
Sbjct: 9 SSSRRSESNGAFITSQLSRFFSAPPSAGDKSSYTIVDHTYDAVVVGAGGAGLRAAIGLSE 68
Query: 341 HGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYM 520
HGFNTACITKLFPTRSHTVAAQGGINAALGNM+ DDWRWHMYDTVKGSDWLGDQDAIQYM
Sbjct: 69 HGFNTACITKLFPTRSHTVAAQGGINAALGNMSVDDWRWHMYDTVKGSDWLGDQDAIQYM 128
Query: 521 CREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLH 700
CREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSL+FG GGQAYRCACAADRTGHALLH
Sbjct: 129 CREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLEFGIGGQAYRCACAADRTGHALLH 188
Query: 701 TLYGQAMRHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFQASSTILATGGYGR 880
TLYGQAM+HNTQFFVEYFALDLIMNSDG+CQGVIALNMEDGTLHRF A STILATGGYGR
Sbjct: 189 TLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFHAGSTILATGGYGR 248
Query: 881 AYFSATSAHTCTGDGNGMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNS 1060
AYFSATSAHTCTGDGN MVARAGLPLQDLEFVQFHPTGIYGAGCLITEG+RGEGGILRNS
Sbjct: 249 AYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGARGEGGILRNS 308
Query: 1061 EGERFMER 1084
EGE+FM+R
Sbjct: 309 EGEKFMDR 316
>gi|195647178|gb|ACG43057.1| unknown [Zea mays]
Length = 619
Score = 565 bits (1456), Expect = 2e-159
Identities = 273/290 (94%), Positives = 282/290 (97%), Gaps = 4/290 (1%)
Frame = +2
Query: 215 SRLFSTESATGRSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 394
SRL ST S SSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT
Sbjct: 18 SRLLSTAS----SSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 73
Query: 395 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPF 574
VAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQD+IQYMCREAPKAVIELENYGLPF
Sbjct: 74 VAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDSIQYMCREAPKAVIELENYGLPF 133
Query: 575 SRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYF 754
SRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHA+LHTLYGQAM+HNTQFFVEYF
Sbjct: 134 SRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYF 193
Query: 755 ALDLIMNSDGSCQGVIALNMEDGTLHRFQASSTILATGGYGRAYFSATSAHTCTGDGNGM 934
ALDL+M++DG CQGVIALNMEDGTLHRF+AS+TILATGGYGRAYFSATSAHTCTGDGN M
Sbjct: 194 ALDLLMDNDGKCQGVIALNMEDGTLHRFRASNTILATGGYGRAYFSATSAHTCTGDGNAM 253
Query: 935 VARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER 1084
VARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER
Sbjct: 254 VARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER 303
>gi|115470493|ref|NP_001058845.1| Os07g0134800 [Oryza sativa (japonica
cultivar-group)]
Length = 630
Score = 565 bits (1455), Expect = 3e-159
Identities = 272/290 (93%), Positives = 284/290 (97%), Gaps = 4/290 (1%)
Frame = +2
Query: 215 SRLFSTESATGRSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 394
+RLFST S SSYTVVDH+YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT
Sbjct: 29 ARLFSTAS----SSYTVVDHSYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHT 84
Query: 395 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPF 574
VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD+IQYMCREAPKAVIELENYGLPF
Sbjct: 85 VAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDSIQYMCREAPKAVIELENYGLPF 144
Query: 575 SRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYF 754
SRTE+GKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHA+LHTLYGQAM+HNTQFFVEYF
Sbjct: 145 SRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYF 204
Query: 755 ALDLIMNSDGSCQGVIALNMEDGTLHRFQASSTILATGGYGRAYFSATSAHTCTGDGNGM 934
ALDLIM+S+G+CQGVIALNMEDGTLHRF+A++TILATGGYGRAYFSATSAHTCTGDGN M
Sbjct: 205 ALDLIMDSEGTCQGVIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAM 264
Query: 935 VARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER 1084
VARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER
Sbjct: 265 VARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER 314
>gi|125557151|gb|EAZ02687.1| hypothetical protein OsI_023919 [Oryza sativa
(indica cultivar-group)]
Length = 644
Score = 560 bits (1442), Expect = 9e-158
Identities = 266/278 (95%), Positives = 277/278 (99%)
Frame = +2
Query: 251 SSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALG 430
SSYTVVDH+YDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALG
Sbjct: 51 SSYTVVDHSYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALG 110
Query: 431 NMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRA 610
NMTEDDWRWHMYDTVKGSDWLGDQD+IQYMCREAPKAVIELENYGLPFSRTE+GKIYQRA
Sbjct: 111 NMTEDDWRWHMYDTVKGSDWLGDQDSIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRA 170
Query: 611 FGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYFALDLIMNSDGSC 790
FGGQSLDFGKGGQAYRCACAADRTGHA+LHTLYGQAM+HNTQFFVEYFALDLIM+S+G+C
Sbjct: 171 FGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSEGTC 230
Query: 791 QGVIALNMEDGTLHRFQASSTILATGGYGRAYFSATSAHTCTGDGNGMVARAGLPLQDLE 970
QGVIALNMEDGTLHRF+A++TILATGGYGRAYFSATSAHTCTGDGN MVARAGLPLQDLE
Sbjct: 231 QGVIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLE 290
Query: 971 FVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER 1084
FVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER
Sbjct: 291 FVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMER 328
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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