BLASTX 7.6.2
Query= RU01420 /QuerySize=237
(236 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|115462241|ref|NP_001054720.1| Os05g0160200 [Oryza sativa (jap... 125 1e-027
gi|1076678|pir||S42643 ubiquitin / ribosomal protein S27a - pota... 122 1e-026
gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula] 121 2e-026
gi|164655831|ref|XP_001729044.1| hypothetical protein MGL_3832 [... 121 2e-026
gi|30679302|ref|NP_849292.1| UBQ14 (ubiquitin 14); protein bindi... 121 3e-026
>gi|115462241|ref|NP_001054720.1| Os05g0160200 [Oryza sativa (japonica
cultivar-group)]
Length = 177
Score = 125 bits (312), Expect = 1e-027
Identities = 63/64 (98%)
Frame = +2
Query: 44 AAAAMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 223
AAA MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 19 AAAKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 78
Query: 224 ADYN 235
ADYN
Sbjct: 79 ADYN 82
>gi|1076678|pir||S42643 ubiquitin / ribosomal protein S27a - potato (fragment)
Length = 126
Score = 122 bits (304), Expect = 1e-026
Identities = 61/62 (98%)
Frame = +2
Query: 50 AAMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 229
A MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD
Sbjct: 44 AKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 103
Query: 230 YN 235
YN
Sbjct: 104 YN 105
>gi|124359683|gb|ABD32351.2| Ubiquitin [Medicago truncatula]
Length = 538
Score = 121 bits (302), Expect = 2e-026
Identities = 60/61 (98%), Positives = 61/61 (100%)
Frame = +2
Query: 53 AMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 232
+MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY
Sbjct: 5 SMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 64
Query: 233 N 235
N
Sbjct: 65 N 65
>gi|164655831|ref|XP_001729044.1| hypothetical protein MGL_3832 [Malassezia
globosa CBS 7966]
Length = 166
Score = 121 bits (302), Expect = 2e-026
Identities = 60/61 (98%), Positives = 61/61 (100%)
Frame = +2
Query: 53 AMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 232
AMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DY
Sbjct: 38 AMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 97
Query: 233 N 235
N
Sbjct: 98 N 98
>gi|30679302|ref|NP_849292.1| UBQ14 (ubiquitin 14); protein binding [Arabidopsis
thaliana]
Length = 305
Score = 121 bits (301), Expect = 3e-026
Identities = 60/60 (100%)
Frame = +2
Query: 56 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 235
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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