Blast details for RU01523 (GenBank)


BLASTX 7.6.2

Query= RU01523 /QuerySize=1047
        (1046 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|147771948|emb|CAN66760.1| hypothetical protein [Vitis vinifera]     131   2e-028
gi|157337533|emb|CAO21879.1| unnamed protein product [Vitis vini...    130   2e-028
gi|30687001|ref|NP_850275.1| TRFL8 (TRF-LIKE 8); DNA binding [Ar...    122   8e-026
gi|147805280|emb|CAN77858.1| hypothetical protein [Vitis vinifera]     116   5e-024
gi|157339964|emb|CAO45641.1| unnamed protein product [Vitis vini...    114   2e-023

>gi|147771948|emb|CAN66760.1| hypothetical protein [Vitis vinifera]

          Length = 587

 Score =  131 bits (327), Expect = 2e-028
 Identities = 70/147 (47%), Positives = 95/147 (64%), Gaps = 15/147 (10%)
 Frame = +3

Query: 558 QPINSESEDE------IVRKKRSKKHDRRKHQRMWDVSEVMALIDGISEYGVGQWTRIKR 719
           +P  +ES+D+      I      K   RRKH  +W +SEVM LI+G+S+YGVG+WT IKR
Sbjct: 427 EPFPAESQDDMSEDDCITIINTQKGRSRRKHHMLWTLSEVMKLIEGVSQYGVGRWTEIKR 486

Query: 720 LLFTSSAYRTPIDLRDKWRNLLRSSCRRKLKKE------VEENEENDMH-LPKSLIYRVR 878
           LLF+SS +RT +DL+DKWRNLLR+SC R   K       VE+  ++  H +P+S++ RVR
Sbjct: 487 LLFSSSTHRTSVDLKDKWRNLLRASCTRLHNKREVGLKLVEQGRKHASHQIPQSVLGRVR 546

Query: 879 ELAKKHPYPRQRGKK--CSPAILPAES 953
           ELA  +PYPR R  K  C+P + P  S
Sbjct: 547 ELALIYPYPRGRKSKDTCTPVVSPIPS 573

>gi|157337533|emb|CAO21879.1| unnamed protein product [Vitis vinifera]

          Length = 156

 Score =  130 bits (326), Expect = 2e-028
 Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 9/141 (6%)
 Frame = +3

Query: 558 QPINSESEDE------IVRKKRSKKHDRRKHQRMWDVSEVMALIDGISEYGVGQWTRIKR 719
           +P  +ES+D+      I      K   RRKH  +W +SEVM LI+G+S+YGVG+WT IKR
Sbjct:   2 EPFPAESQDDMSEDDCITIINTQKGRSRRKHHMLWTLSEVMKLIEGVSQYGVGRWTEIKR 61

Query: 720 LLFTSSAYRTPIDLRDKWRNLLRSSCRR-KLKKEVEENEENDMHLPKSLIYRVRELAKKH 896
           LLF+SS +RT +DL+DKWRNLLR+SC R   K+EV         +P+S++ RVRELA  +
Sbjct:  62 LLFSSSTHRTSVDLKDKWRNLLRASCTRLHNKREVGLKLHASHQIPQSVLGRVRELALIY 121

Query: 897 PYPRQRGKK--CSPAILPAES 953
           PYPR R  K  C+P + P  S
Sbjct: 122 PYPRGRKSKDTCTPVVSPIPS 142

>gi|30687001|ref|NP_850275.1| TRFL8 (TRF-LIKE 8); DNA binding [Arabidopsis
        thaliana]

          Length = 410

 Score =  122 bits (304), Expect = 8e-026
 Identities = 65/136 (47%), Positives = 87/136 (63%), Gaps = 7/136 (5%)
 Frame = +3

Query: 570 SESEDEI-VRKKRSKKHDRRKHQRMWDVSEVMALIDGISEYGVGQWTRIKRLLFTSSAYR 746
           SESED+I V K    K DRRK+QR+W + EVM L+DGIS +GVG+WT IK   F  +A+R
Sbjct: 270 SESEDDISVTKTSRTKSDRRKNQRIWTLDEVMNLVDGISHFGVGKWTDIKNHFFHYAAHR 329

Query: 747 TPIDLRDKWRNLLRSSCRRKLKKEVEENEENDM--HLPKSLIYRVRELAKKHPYPRQRGK 920
            P+D+RDKWRNLL++S   K      E +   +   +PK +++RVRELA  HPYP  +  
Sbjct: 330 KPVDIRDKWRNLLKASYNEKHNDGQAEEKRKSVARSIPKDILHRVRELASLHPYPFSK-- 387

Query: 921 KCSPAILPAESKGAST 968
             SP I+   S+  ST
Sbjct: 388 --SPCIVHDSSRSRST 401

>gi|147805280|emb|CAN77858.1| hypothetical protein [Vitis vinifera]

          Length = 867

 Score =  116 bits (288), Expect = 5e-024
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 9/213 (4%)
 Frame = +3

Query: 282 FKIRIARPKKQAIR-TEFQPITSESEDEIVRVTISEKHDRRKDQPIKSKSDNERAITKIS 458
           F++R +RP+K  +   +F   +     ++V+  +  +   R D    S++DNE     + 
Sbjct: 628 FRVRRSRPRKNFMALMKFNTNSMGMAAKLVKKALGVR-SSRTDNVRSSRTDNEGGNKVLQ 686

Query: 459 KKHDRRK------DQPIKSESEDETVTRRRSTRHNRRKHQPINSESEDEIVRKKRSKKHD 620
            +   ++       +P+K E      T     R   +        S+D I     +K   
Sbjct: 687 SRPAPKRLQLPLIGEPVKHEQCSVADTIELEQRVELKHVDSSGDTSDDNIATVPTAKGGM 746

Query: 621 RRKHQRMWDVSEVMALIDGISEYGVGQWTRIKRLLFTSSAYRTPIDLRDKWRNLLRSS-C 797
           RRKH R W +SEVM L+DG+S YG G+W+ IKRL F S +YRT +DL+DKWRNLLR+S  
Sbjct: 747 RRKHHRAWTLSEVMKLVDGVSRYGAGRWSEIKRLAFASYSYRTSVDLKDKWRNLLRASFA 806

Query: 798 RRKLKKEVEENEENDMHLPKSLIYRVRELAKKH 896
               +K +   +   M +P +++ +VRELA+ H
Sbjct: 807 LSPAEKGMSSRKHGSMPIPAAILLKVRELAEMH 839

>gi|157339964|emb|CAO45641.1| unnamed protein product [Vitis vinifera]

          Length = 562

 Score =  114 bits (284), Expect = 2e-023
 Identities = 66/207 (31%), Positives = 108/207 (52%), Gaps = 9/207 (4%)
 Frame = +3

Query: 282 FKIRIARPKKQAIR-TEFQPITSESEDEIVRVTISEKHDRRKDQPIKSKSDNERAITKIS 458
           F++R +RP+K  +   +F   +     ++V+  +  +  R  ++ ++S+   +R    + 
Sbjct: 335 FRVRRSRPRKNFMALMKFNTNSMGMAAKLVKKALGVRSSRTDNEVLQSRPAPKRLQLPLI 394

Query: 459 KKHDRRKDQPIKSESEDETVTRRRSTRHNRRKHQPINSESEDEIVRKKRSKKHDRRKHQR 638
                   +P+K E      T     R   +        S+D I     +K   RRKH R
Sbjct: 395 -------GEPVKHEQCSVADTIELEQRVELKHVDSSGDTSDDNIATVPTAKGGMRRKHHR 447

Query: 639 MWDVSEVMALIDGISEYGVGQWTRIKRLLFTSSAYRTPIDLRDKWRNLLRSS-CRRKLKK 815
            W +SEVM L+DG+S YG G+W+ IKRL F S +YRT +DL+DKWRNLLR+S      +K
Sbjct: 448 AWTLSEVMKLVDGVSRYGAGRWSEIKRLAFASYSYRTSVDLKDKWRNLLRASFALSPAEK 507

Query: 816 EVEENEENDMHLPKSLIYRVRELAKKH 896
            +   +   M +P +++ +VRELA+ H
Sbjct: 508 GMSSRKHGSMPIPAAILLKVRELAEMH 534

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0