BLASTX 7.6.2
Query= RU01692 /QuerySize=796
(795 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|6984222|gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [E... 281 6e-074
gi|147790060|emb|CAN75982.1| hypothetical protein [Vitis vinifera] 277 7e-073
gi|147826473|emb|CAN72805.1| hypothetical protein [Vitis vinifera] 276 2e-072
gi|116778782|gb|ABK20993.1| unknown [Picea sitchensis] 272 2e-071
gi|118482044|gb|ABK92953.1| unknown [Populus trichocarpa] 270 8e-071
>gi|6984222|gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia
esula]
Length = 144
Score = 281 bits (717), Expect = 6e-074
Identities = 139/144 (96%), Positives = 141/144 (97%)
Frame = -3
Query: 718 AAPPIKSVQCFGRKKTAVAVTYCKEGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 539
AA P +SVQCFGRKKTAVAVT+CK GRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR
Sbjct: 1 AATPTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60
Query: 538 FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVA 359
FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVA
Sbjct: 61 FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVA 120
Query: 358 DPRRCEPKKFGGRGARARFQKSYR 287
DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144
>gi|147790060|emb|CAN75982.1| hypothetical protein [Vitis vinifera]
Length = 144
Score = 277 bits (708), Expect = 7e-073
Identities = 136/143 (95%), Positives = 140/143 (97%)
Frame = -3
Query: 715 APPIKSVQCFGRKKTAVAVTYCKEGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 536
A PI+SVQCFGRKKTAVAVTYCK GRGLIKINGCPIEL+EPEILR KAYEPILLLGRHRF
Sbjct: 2 AAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRHKAYEPILLLGRHRF 61
Query: 535 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVAD 356
AGVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 62 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 121
Query: 355 PRRCEPKKFGGRGARARFQKSYR 287
PRRCEPKKFGGRGARARFQKSYR
Sbjct: 122 PRRCEPKKFGGRGARARFQKSYR 144
>gi|147826473|emb|CAN72805.1| hypothetical protein [Vitis vinifera]
Length = 144
Score = 276 bits (704), Expect = 2e-072
Identities = 135/143 (94%), Positives = 140/143 (97%)
Frame = -3
Query: 715 APPIKSVQCFGRKKTAVAVTYCKEGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 536
A P++SVQCFGRKKTAVAVTYCK GRGLIKINGCPIELVEPEILR+KA EPILLLGRHRF
Sbjct: 2 ASPVESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRYKAVEPILLLGRHRF 61
Query: 535 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVAD 356
AGVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 62 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 121
Query: 355 PRRCEPKKFGGRGARARFQKSYR 287
PRRCEPKKFGGRGARARFQKSYR
Sbjct: 122 PRRCEPKKFGGRGARARFQKSYR 144
>gi|116778782|gb|ABK20993.1| unknown [Picea sitchensis]
Length = 143
Score = 272 bits (695), Expect = 2e-071
Identities = 132/140 (94%), Positives = 138/140 (98%)
Frame = -3
Query: 706 IKSVQCFGRKKTAVAVTYCKEGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 527
+ SVQCFGRKKTAVAVTYCK GRGLIKINGCPIEL+EPEILR+KA+EPILLLGRHRFAGV
Sbjct: 4 VDSVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELIEPEILRYKAFEPILLLGRHRFAGV 63
Query: 526 DMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVADPRR 347
DMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDEQSKKEIKDILVRYDRTLLVADPRR
Sbjct: 64 DMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRR 123
Query: 346 CEPKKFGGRGARARFQKSYR 287
CEPKKFGGRGARARFQKSYR
Sbjct: 124 CEPKKFGGRGARARFQKSYR 143
>gi|118482044|gb|ABK92953.1| unknown [Populus trichocarpa]
Length = 144
Score = 270 bits (690), Expect = 8e-071
Identities = 134/143 (93%), Positives = 138/143 (96%)
Frame = -3
Query: 715 APPIKSVQCFGRKKTAVAVTYCKEGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 536
A P +SVQCFGRKKTAVAVT+CK GRGLIKINGCPIELVEPEILRFKAYEPILLLGR RF
Sbjct: 2 AAPTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRQRF 61
Query: 535 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVAD 356
AGVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDEQSKKEIKDILVRYDRTLLVAD
Sbjct: 62 AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVAD 121
Query: 355 PRRCEPKKFGGRGARARFQKSYR 287
PRRCE KKFGGRGARARFQKSYR
Sbjct: 122 PRRCETKKFGGRGARARFQKSYR 144
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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