BLASTX 7.6.2
Query= RU01784 /QuerySize=1325
(1324 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|87240537|gb|ABD32395.1| Histone-fold/TFIID-TAF/NF-Y [Medicago... 405 6e-111
gi|171854663|dbj|BAG16521.1| putative CONSTANS interacting prote... 348 7e-094
gi|77999309|gb|ABB17001.1| unknown [Solanum tuberosum] 343 2e-092
gi|147810462|emb|CAN61083.1| hypothetical protein [Vitis vinifera] 334 1e-089
gi|45544869|gb|AAS67370.1| CONSTANS interacting protein 2b [Lyco... 325 8e-087
>gi|87240537|gb|ABD32395.1| Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula]
Length = 249
Score = 405 bits (1039), Expect = 6e-111
Identities = 202/244 (82%), Positives = 219/244 (89%), Gaps = 4/244 (1%)
Frame = -2
Query: 1089 MVGSGAQLAYGTAPYQHTQMVGSPNPATVGAPVGGIQSSSQSAGAQLQQHQLAYRHIHQQ 910
+VGSG+Q+ YG+ PYQ QM G+ P +V VGG+QS+ Q AGAQL QHQLAY+HIHQQ
Sbjct: 3 VVGSGSQMPYGSNPYQSNQMTGA--PGSVVTSVGGMQSTGQPAGAQLGQHQLAYQHIHQQ 60
Query: 909 QQQQLQQQLQSFWANQFQEIEKVTDFKDHSLPLARIKKIMKADEDVRMISAEAPVIFARA 730
QQQQLQQQLQSFW+NQ+QEIEKVTDFK+HSLPLARIKKIMKADEDVRMISAEAPVIFARA
Sbjct: 61 QQQQLQQQLQSFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARA 120
Query: 729 CEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIP 550
CEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIP
Sbjct: 121 CEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIP 180
Query: 549 RGTVSV-GAADALPPYCYMPPQHGPQVGAPGMIMGKPMMDPSMYGQQSHPYMAPQMWPQA 373
RGT+ V G ADAL PYCYMPPQH QVG G+IMGKP+MDP+MY QQ HPYMAPQMWPQ
Sbjct: 181 RGTMPVAGPADAL-PYCYMPPQHASQVGTAGVIMGKPVMDPNMYAQQPHPYMAPQMWPQP 239
Query: 372 PEQQ 361
PEQ+
Sbjct: 240 PEQR 243
>gi|171854663|dbj|BAG16521.1| putative CONSTANS interacting protein 2b [Capsicum
chinense]
Length = 258
Score = 348 bits (892), Expect = 7e-094
Identities = 184/258 (71%), Positives = 206/258 (79%), Gaps = 8/258 (3%)
Frame = -2
Query: 1125 DQQGHGQPQSMGMVGSGAQLAYGTAPYQHTQMVGSPNPATVGAPVGGIQSSSQSA-GAQL 949
D G+GQP +G++ S A + YG APYQ QM G PA + Q++ SA AQ+
Sbjct: 2 DHHGNGQPPGIGVITSSAPV-YG-APYQANQMAGPSPPAVSAGAIQSPQAAGLSASSAQM 59
Query: 948 QQHQLAYRHIHQQQQQQLQQQLQSFWANQFQEIEKVTDFKDHSLPLARIKKIMKADEDVR 769
QHQLAY+ IHQQQQQQLQQQLQSFWANQ+QEIE VTDFK+HSLPLARIKKIMKADEDVR
Sbjct: 60 AQHQLAYQQIHQQQQQQLQQQLQSFWANQYQEIEHVTDFKNHSLPLARIKKIMKADEDVR 119
Query: 768 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 589
MISAEAPV+FARACEMFILELTLR+WNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 120 MISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 179
Query: 588 REDLKDEVLASIPRGTVSVGA-ADALPPYCYMPPQHGPQVGAPGMIMGKPMMDPSMYGQQ 412
REDLKDEVLASIPRGT+ VG + LP Y MPPQ P +GAPG+ MGKP +D ++Y QQ
Sbjct: 180 REDLKDEVLASIPRGTLPVGGPTEGLPFYYGMPPQSAPPMGAPGLYMGKP-VDQALYAQQ 238
Query: 411 SHPYMAPQMWPQAPEQQQ 358
PYMA +WPQ QQQ
Sbjct: 239 PRPYMAQPIWPQ---QQQ 253
>gi|77999309|gb|ABB17001.1| unknown [Solanum tuberosum]
Length = 256
Score = 343 bits (879), Expect = 2e-092
Identities = 186/259 (71%), Positives = 206/259 (79%), Gaps = 18/259 (6%)
Frame = -2
Query: 1116 GHGQPQSMGMVGSGAQLAYGTAPYQHTQMVGSPNPATVGAPVGGIQSSSQSAG-----AQ 952
G+GQP +G+V S A + YG APYQ QM G P G IQ S Q+AG AQ
Sbjct: 5 GNGQPPGIGVVTSSAPI-YG-APYQANQMAGPP-----AVSAGAIQ-SPQAAGLSASSAQ 56
Query: 951 LQQHQLAYRHIHQQQQQQLQQQLQSFWANQFQEIEKVTDFKDHSLPLARIKKIMKADEDV 772
+ QHQLAY+HIHQQQQQQLQQQLQ+FWANQ+QEIE VTDFK+HSLPLARIKKIMKADEDV
Sbjct: 57 MAQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEHVTDFKNHSLPLARIKKIMKADEDV 116
Query: 771 RMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 592
RMISAEAPV+FARACEMFILELTLR+WNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV
Sbjct: 117 RMISAEAPVVFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 176
Query: 591 PREDLKDEVLASIPRGTVSVGA-ADALPPYCYMPPQHGPQVGAPGMIMGKPMMDPSMYGQ 415
PREDLKDEVLA+IPRGT+ VG + LP Y MPPQ +GAPGM MGKP +D ++Y Q
Sbjct: 177 PREDLKDEVLATIPRGTLPVGGPTEGLPFYYGMPPQSAQPIGAPGMYMGKP-VDQALYAQ 235
Query: 414 QSHPYMAPQMWPQAPEQQQ 358
Q PYMA +WPQ QQQ
Sbjct: 236 QPRPYMAQPIWPQ---QQQ 251
>gi|147810462|emb|CAN61083.1| hypothetical protein [Vitis vinifera]
Length = 264
Score = 334 bits (855), Expect = 1e-089
Identities = 168/207 (81%), Positives = 175/207 (84%)
Frame = -2
Query: 1128 MDQQGHGQPQSMGMVGSGAQLAYGTAPYQHTQMVGSPNPATVGAPVGGIQSSSQSAGAQL 949
MD QGHGQ MGM GS AQL YGT PYQH QM G+P +V VG IQS AGAQL
Sbjct: 1 MDHQGHGQTPVMGMAGSAAQLPYGTNPYQHNQMGGTPTSGSVVTSVGTIQSPGHPAGAQL 60
Query: 948 QQHQLAYRHIHQQQQQQLQQQLQSFWANQFQEIEKVTDFKDHSLPLARIKKIMKADEDVR 769
QHQLAY+H+H QQQQQLQQQLQSFWANQ QEIEK TDFK+HSLPLARIKKIMKADEDVR
Sbjct: 61 AQHQLAYQHMHHQQQQQLQQQLQSFWANQHQEIEKATDFKNHSLPLARIKKIMKADEDVR 120
Query: 768 MISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 589
MISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180
Query: 588 REDLKDEVLASIPRGTVSVGAADALPP 508
REDLKDEVL SIPRGT+ VG A P
Sbjct: 181 REDLKDEVLTSIPRGTMPVGGASVHSP 207
>gi|45544869|gb|AAS67370.1| CONSTANS interacting protein 2b [Lycopersicon
esculentum]
Length = 228
Score = 325 bits (831), Expect = 8e-087
Identities = 172/230 (74%), Positives = 190/230 (82%), Gaps = 13/230 (5%)
Frame = -2
Query: 1029 VGSPNPATVGAPVGGIQSSSQSAG-----AQLQQHQLAYRHIHQQQQQQLQQQLQSFWAN 865
+ P+P V A G IQ S Q+AG AQ+ QHQLAY+HIHQQQQQQLQQQLQ+FWAN
Sbjct: 1 MAGPSPPAVSA--GAIQ-SPQAAGLAASSAQMAQHQLAYQHIHQQQQQQLQQQLQTFWAN 57
Query: 864 QFQEIEKVTDFKDHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNH 685
Q+QEIE VTDFK+HSLPLARIKKIMKADEDVRMISAEAPV+FARACEMFILELTLR+WNH
Sbjct: 58 QYQEIEHVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRAWNH 117
Query: 684 TEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTVSVGA-ADALPP 508
TEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLA+IPRGT+ VG + LP
Sbjct: 118 TEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLATIPRGTLPVGGPTEGLPF 177
Query: 507 YCYMPPQHGPQVGAPGMIMGKPMMDPSMYGQQSHPYMAPQMWPQAPEQQQ 358
Y MPPQ +GAPGM MGKP +D ++Y QQ PYMA +WPQ QQQ
Sbjct: 178 YYGMPPQSAQPIGAPGMYMGKP-VDQALYAQQPRPYMAQPIWPQ---QQQ 223
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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