BLASTX 7.6.2
Query= RU01822 /QuerySize=378
(377 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157335758|emb|CAO61588.1| unnamed protein product [Vitis vini... 200 3e-050
gi|15233844|ref|NP_194178.1| ZIM (ZINC-FINGER PROTEIN EXPRESSED ... 176 4e-043
gi|8918531|dbj|BAA97678.1| ZIM [Arabidopsis thaliana] 176 4e-043
gi|157357757|emb|CAO64751.1| unnamed protein product [Vitis vini... 149 6e-035
gi|26451385|dbj|BAC42792.1| unknown protein [Arabidopsis thaliana] 92 6e-018
>gi|157335758|emb|CAO61588.1| unnamed protein product [Vitis vinifera]
Length = 294
Score = 200 bits (507), Expect = 3e-050
Identities = 94/124 (75%), Positives = 107/124 (86%)
Frame = -2
Query: 373 RQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSSKKSDGDYSWGSGQESRQDDSNAETS 194
RQKRKERCFDKK+RY+VRQEVALRMQRNKGQF+SSKKS+G +SW S Q+S QD+S ET
Sbjct: 145 RQKRKERCFDKKIRYNVRQEVALRMQRNKGQFSSSKKSEGTFSWDSVQDSGQDESPPETL 204
Query: 193 CTHCGTSSKCTPMMRRGPSGPRSLCNACGLFWANRGVLRDISKRPPGHSQAAGEQGEAEA 14
CTHCGTSSK TPMMRRGP+GPRSLCNACGLFWANRG LRD+SK+ HS E+G+ EA
Sbjct: 205 CTHCGTSSKSTPMMRRGPTGPRSLCNACGLFWANRGSLRDLSKKNQDHSLNQIERGDGEA 264
Query: 13 DDSD 2
+DSD
Sbjct: 265 NDSD 268
>gi|15233844|ref|NP_194178.1| ZIM (ZINC-FINGER PROTEIN EXPRESSED IN
INFLORESCENCE MERISTEM); transcription factor [Arabidopsis thaliana]
Length = 309
Score = 176 bits (445), Expect = 4e-043
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = -2
Query: 373 RQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSSKKSDGDYSWGSGQESRQDDSNAETS 194
R+KR RCF+KKVRY VRQEVALRM RNKGQFTSSK +DG Y+ G+ Q+S QDD++ E S
Sbjct: 154 RKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPEIS 213
Query: 193 CTHCGTSSKCTPMMRRGPSGPRSLCNACGLFWANRGVLRDISKR 62
CTHCG SSKCTPMMRRGPSGPR+LCNACGLFWANRG LRD+SK+
Sbjct: 214 CTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKK 257
>gi|8918531|dbj|BAA97678.1| ZIM [Arabidopsis thaliana]
Length = 309
Score = 176 bits (445), Expect = 4e-043
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = -2
Query: 373 RQKRKERCFDKKVRYSVRQEVALRMQRNKGQFTSSKKSDGDYSWGSGQESRQDDSNAETS 194
R+KR RCF+KKVRY VRQEVALRM RNKGQFTSSK +DG Y+ G+ Q+S QDD++ E S
Sbjct: 154 RKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPEIS 213
Query: 193 CTHCGTSSKCTPMMRRGPSGPRSLCNACGLFWANRGVLRDISKR 62
CTHCG SSKCTPMMRRGPSGPR+LCNACGLFWANRG LRD+SK+
Sbjct: 214 CTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKK 257
>gi|157357757|emb|CAO64751.1| unnamed protein product [Vitis vinifera]
Length = 302
Score = 149 bits (375), Expect = 6e-035
Identities = 74/127 (58%), Positives = 91/127 (71%), Gaps = 8/127 (6%)
Frame = -2
Query: 364 RKERCFDKKVRYSVRQEVALRMQRNKGQFTSSKKSDGDY------SWGSGQESRQDDSNA 203
RKERCFDKK+RY+VR+EVALRMQR KGQFTSSK S + W + S QD+
Sbjct: 154 RKERCFDKKIRYTVRKEVALRMQRKKGQFTSSKASSDEVGGGASSDWNAAHGSGQDE--P 211
Query: 202 ETSCTHCGTSSKCTPMMRRGPSGPRSLCNACGLFWANRGVLRDISKRPPGHSQAAGEQGE 23
E CTHCGTSSK TPMMRRGP+GPRSLCNACGL WAN+GVLRD+S+ G + + + +
Sbjct: 212 EILCTHCGTSSKTTPMMRRGPAGPRSLCNACGLKWANKGVLRDLSRVSSGVQETSLKATQ 271
Query: 22 AEADDSD 2
+ D ++
Sbjct: 272 SNGDANE 278
>gi|26451385|dbj|BAC42792.1| unknown protein [Arabidopsis thaliana]
Length = 123
Score = 92 bits (228), Expect = 6e-018
Identities = 41/66 (62%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Frame = -2
Query: 244 WGSGQE---SRQDDSNAETSCTHCGTSSKCTPMMRRGPSGPRSLCNACGLFWANRGVLRD 74
WGS Q + E C HCGTS K TPMMRRGP GPR+LCNACGL WAN+G LRD
Sbjct: 25 WGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRD 84
Query: 73 ISKRPP 56
+SK PP
Sbjct: 85 LSKVPP 90
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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