BLASTX 7.6.2
Query= RU01960 /QuerySize=980
(979 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157336396|emb|CAO71081.1| unnamed protein product [Vitis vini... 349 3e-094
gi|79516480|ref|NP_197401.2| ATBPM1 (BTB-POZ AND MATH DOMAIN 1);... 331 7e-089
gi|194699142|gb|ACF83655.1| unknown [Zea mays] 328 5e-088
gi|195636840|gb|ACG37888.1| unknown [Zea mays] 328 5e-088
gi|18397497|ref|NP_566275.1| ATBPM2; protein binding [Arabidopsi... 327 1e-087
>gi|157336396|emb|CAO71081.1| unnamed protein product [Vitis vinifera]
Length = 405
Score = 349 bits (893), Expect = 3e-094
Identities = 172/235 (73%), Positives = 205/235 (87%), Gaps = 7/235 (2%)
Frame = +2
Query: 2 PKTYAIAVPPSNMGQHFGKLL*SGKGTDVSFEVDQEVFSAHKVVLAGRSPVFRAQLFGPL 181
PK Y IAV PSN+GQHFG+LL SGKGTDV+FEVD E+FSAHK+VLA RSPVFRAQLFGP+
Sbjct: 177 PKIYTIAVMPSNIGQHFGQLLESGKGTDVNFEVDGEIFSAHKLVLAARSPVFRAQLFGPM 236
Query: 182 KDKNSCFIKVEDIEAPVFKVLLHFIYWDALPDMEELLGLSSNWASAQTTLMAQHLLAAAD 361
KD N+ IK+ED+EAP LLHF YWDALPDM+EL+G++S WAS T+MAQHLLAAAD
Sbjct: 237 KDCNTQLIKIEDMEAP---ALLHFTYWDALPDMQELVGMNSKWAS---TMMAQHLLAAAD 290
Query: 362 RYALERLKVLCEAKLCENVAINNVATTLALAEQHHCFQLKAVCLKFIAVPENLRAVIETD 541
RY L+RL++LCE KLCE+VAIN VATTLALAEQHHCFQLKAVCLKF+A+PENL+AV++TD
Sbjct: 291 RYGLDRLRLLCEDKLCEDVAINTVATTLALAEQHHCFQLKAVCLKFVALPENLKAVMQTD 350
Query: 542 GYKYLTESCPSVITELLQYVARIGEHSFIAGGYG-KGTLLDGSDMHGRRVKPRLY 703
G+ YL +SCPSV+TELL+YVARIGEHS I G+G + LLDGSD++GRRVK R++
Sbjct: 351 GFDYLKQSCPSVLTELLEYVARIGEHSVIVCGHGNENILLDGSDVNGRRVKQRIF 405
>gi|79516480|ref|NP_197401.2| ATBPM1 (BTB-POZ AND MATH DOMAIN 1); protein
binding [Arabidopsis thaliana]
Length = 407
Score = 331 bits (847), Expect = 7e-089
Identities = 164/234 (70%), Positives = 190/234 (81%), Gaps = 3/234 (1%)
Frame = +2
Query: 2 PKTYAIAVPPSNMGQHFGKLL*SGKGTDVSFEVDQEVFSAHKVVLAGRSPVFRAQLFGPL 181
P+ Y I VP SN+GQ G LL SGKG DV F+VD E F+AHK+VLA RSPVF AQLFGPL
Sbjct: 177 PRYYNIPVPVSNLGQQLGNLLESGKGCDVVFQVDGETFNAHKLVLATRSPVFNAQLFGPL 236
Query: 182 KDKNSCFIKVEDIEAPVFKVLLHFIYWDALPDMEELLGLSSNWASAQTTLMAQHLLAAAD 361
D+N+ I +ED+EAP+FKVLLHFIYWD LPDM+EL+G S AS TL+AQHLLAAAD
Sbjct: 237 GDRNTKCITIEDMEAPIFKVLLHFIYWDELPDMQELIGTDSTLAS---TLVAQHLLAAAD 293
Query: 362 RYALERLKVLCEAKLCENVAINNVATTLALAEQHHCFQLKAVCLKFIAVPENLRAVIETD 541
RYALERLK +CE+KLCE VAIN VATTLALAEQHHC QLKAVCLKF+A+PENL+AV++TD
Sbjct: 294 RYALERLKAICESKLCEGVAINTVATTLALAEQHHCLQLKAVCLKFVALPENLKAVMQTD 353
Query: 542 GYKYLTESCPSVITELLQYVARIGEHSFIAGGYGKGTLLDGSDMHGRRVKPRLY 703
G+ YL ESCPS++TELLQYVAR+ EHS I G+ K DG D GRRVKPRL+
Sbjct: 354 GFDYLKESCPSLLTELLQYVARLSEHSVIVSGHRKEIFADGCDASGRRVKPRLH 407
>gi|194699142|gb|ACF83655.1| unknown [Zea mays]
Length = 426
Score = 328 bits (840), Expect = 5e-088
Identities = 161/232 (69%), Positives = 192/232 (82%), Gaps = 4/232 (1%)
Frame = +2
Query: 2 PKTYAIAVPPSNMGQHFGKLL*SGKGTDVSFEVDQEVFSAHKVVLAGRSPVFRAQLFGPL 181
PK Y I VP SNM H G+LL SGK TD++FEVD E+F AHKV+L+ RSPVFRAQLFGP+
Sbjct: 198 PKIYTIPVPRSNMALHIGQLLTSGKRTDIAFEVDGEMFPAHKVILSARSPVFRAQLFGPM 257
Query: 182 KDKNSCFIKVEDIEAPVFKVLLHFIYWDALPDMEELLGLSSNWASAQTTLMAQHLLAAAD 361
KDK+ IK+ED+EAPVFK LLHF+YWD LPD+EEL G+++ W S TLMAQHLLAAAD
Sbjct: 258 KDKDMKCIKIEDMEAPVFKALLHFMYWDELPDLEELTGVNTTWVS---TLMAQHLLAAAD 314
Query: 362 RYALERLKVLCEAKLCENVAINNVATTLALAEQHHCFQLKAVCLKFIAVPENLRAVIETD 541
RYALERLK+LCE KLCE+VAIN VA TLALAEQHHC+QLK VCLKF+A+PENL+AV++TD
Sbjct: 315 RYALERLKLLCELKLCEDVAINTVANTLALAEQHHCYQLKTVCLKFVALPENLKAVMQTD 374
Query: 542 GYKYLTESCPSVITELLQYVARIGEHSFIAGGYGKGTLLDGSDMHGRRVKPR 697
G+ YL +SCPS++TELL+YVA+IGEHS Y +LDG D +GRRVKPR
Sbjct: 375 GFDYLQQSCPSLLTELLEYVAKIGEHSVSPCLYST-EVLDGGDANGRRVKPR 425
>gi|195636840|gb|ACG37888.1| unknown [Zea mays]
Length = 309
Score = 328 bits (840), Expect = 5e-088
Identities = 161/232 (69%), Positives = 192/232 (82%), Gaps = 4/232 (1%)
Frame = +2
Query: 2 PKTYAIAVPPSNMGQHFGKLL*SGKGTDVSFEVDQEVFSAHKVVLAGRSPVFRAQLFGPL 181
PK Y I VP SNM H G+LL SGK TD++FEVD E+F AHKV+L+ RSPVFRAQLFGP+
Sbjct: 81 PKIYTIPVPRSNMALHIGQLLTSGKRTDIAFEVDGEMFPAHKVILSARSPVFRAQLFGPM 140
Query: 182 KDKNSCFIKVEDIEAPVFKVLLHFIYWDALPDMEELLGLSSNWASAQTTLMAQHLLAAAD 361
KDK+ IK+ED+EAPVFK LLHF+YWD LPD+EEL G+++ W S TLMAQHLLAAAD
Sbjct: 141 KDKDMKCIKIEDMEAPVFKALLHFMYWDELPDLEELTGVNTTWVS---TLMAQHLLAAAD 197
Query: 362 RYALERLKVLCEAKLCENVAINNVATTLALAEQHHCFQLKAVCLKFIAVPENLRAVIETD 541
RYALERLK+LCE KLCE+VAIN VA TLALAEQHHC+QLK VCLKF+A+PENL+AV++TD
Sbjct: 198 RYALERLKLLCELKLCEDVAINTVANTLALAEQHHCYQLKTVCLKFVALPENLKAVMQTD 257
Query: 542 GYKYLTESCPSVITELLQYVARIGEHSFIAGGYGKGTLLDGSDMHGRRVKPR 697
G+ YL +SCPS++TELL+YVA+IGEHS Y +LDG D +GRRVKPR
Sbjct: 258 GFDYLQQSCPSLLTELLEYVAKIGEHSVSPCLYST-EVLDGGDANGRRVKPR 308
>gi|18397497|ref|NP_566275.1| ATBPM2; protein binding [Arabidopsis thaliana]
Length = 406
Score = 327 bits (836), Expect = 1e-087
Identities = 156/234 (66%), Positives = 192/234 (82%), Gaps = 3/234 (1%)
Frame = +2
Query: 2 PKTYAIAVPPSNMGQHFGKLL*SGKGTDVSFEVDQEVFSAHKVVLAGRSPVFRAQLFGPL 181
P+ Y I VP S +GQ FGKLL SGKG DV+FEVD E F AHK+VLA RS VFRAQLFGPL
Sbjct: 176 PRCYNIPVPVSGLGQQFGKLLESGKGADVTFEVDGETFPAHKLVLAARSAVFRAQLFGPL 235
Query: 182 KDKNSCFIKVEDIEAPVFKVLLHFIYWDALPDMEELLGLSSNWASAQTTLMAQHLLAAAD 361
+ +N+ I +ED++AP+FK+LLHFIYWD +PDM++L+G WAS TL+AQHLLAAAD
Sbjct: 236 RSENTNCIIIEDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWAS---TLVAQHLLAAAD 292
Query: 362 RYALERLKVLCEAKLCENVAINNVATTLALAEQHHCFQLKAVCLKFIAVPENLRAVIETD 541
RYALERL+ +CE+KLCE ++IN VATTLALAEQHHCFQLKA CLKFIA+PENL+AV+ETD
Sbjct: 293 RYALERLRTICESKLCEGISINTVATTLALAEQHHCFQLKAACLKFIALPENLKAVMETD 352
Query: 542 GYKYLTESCPSVITELLQYVARIGEHSFIAGGYGKGTLLDGSDMHGRRVKPRLY 703
G+ YL ESCPS+++ELL+YVAR+ EHS + G+ K DG D++GRRVK RL+
Sbjct: 353 GFDYLKESCPSLLSELLEYVARLSEHSLTSSGHRKELFADGCDLNGRRVKQRLH 406
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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