BLASTX 7.6.2
Query= RU02088 /QuerySize=769
(768 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|118482187|gb|ABK93022.1| unknown [Populus trichocarpa] 156 2e-036
gi|192910792|gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis gu... 156 2e-036
gi|76573317|gb|ABA46763.1| unknown [Solanum tuberosum] 152 3e-035
gi|192908658|gb|ACF06437.1| ribosomal L28-like protein [Elaeis g... 149 2e-034
gi|118481531|gb|ABK92708.1| unknown [Populus trichocarpa] 149 3e-034
>gi|118482187|gb|ABK93022.1| unknown [Populus trichocarpa]
Length = 146
Score = 156 bits (394), Expect = 2e-036
Identities = 79/96 (82%), Positives = 88/96 (91%)
Frame = -1
Query: 543 GLANKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNF 364
GLANKKTV IQP KDQ+VVLATTKT+KQNKPA+L+HKSVM+KEF RMAKAV NQV DN
Sbjct: 50 GLANKKTVTIQPADKDQAVVLATTKTKKQNKPAALLHKSVMKKEFSRMAKAVENQVADNN 109
Query: 363 YRPDLKKAALARLSVVYRSLKVSKSGAKKRNRQAVR 256
YRPDLK+AALARLSVV+RSLKVSKSG KKRNRQA++
Sbjct: 110 YRPDLKRAALARLSVVHRSLKVSKSGVKKRNRQALK 145
>gi|192910792|gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]
Length = 148
Score = 156 bits (394), Expect = 2e-036
Identities = 78/97 (80%), Positives = 89/97 (91%)
Frame = -1
Query: 543 GLANKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNF 364
GLANKKTV+IQPGGKD SVVLATTKT+KQNKPA+L HKS M+KEF +MAKAV NQV +N+
Sbjct: 50 GLANKKTVSIQPGGKDLSVVLATTKTKKQNKPANLYHKSAMKKEFRKMAKAVMNQVTENY 109
Query: 363 YRPDLKKAALARLSVVYRSLKVSKSGAKKRNRQAVRM 253
YRPDL KAALARLS V+RSLKV+KSGAKKRNRQAV++
Sbjct: 110 YRPDLTKAALARLSAVHRSLKVAKSGAKKRNRQAVKV 146
>gi|76573317|gb|ABA46763.1| unknown [Solanum tuberosum]
Length = 143
Score = 152 bits (383), Expect = 3e-035
Identities = 78/94 (82%), Positives = 88/94 (93%)
Frame = -1
Query: 543 GLANKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNF 364
GLANKKTV IQP GKD+SV+LAT+KT+KQN P+SL++KSVM+KEF RMAKAVTNQV DN+
Sbjct: 50 GLANKKTVTIQPEGKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTNQVGDNY 109
Query: 363 YRPDLKKAALARLSVVYRSLKVSKSGAKKRNRQA 262
YRPDLKKAALARLSVV RSLKV+KSGAKKRNRQA
Sbjct: 110 YRPDLKKAALARLSVVNRSLKVTKSGAKKRNRQA 143
>gi|192908658|gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]
Length = 148
Score = 149 bits (376), Expect = 2e-034
Identities = 75/97 (77%), Positives = 87/97 (89%)
Frame = -1
Query: 543 GLANKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNF 364
GLANKKTV IQPGGKD SVVLAT+KT+KQNKP +L ++SVM+KEF +MAKAV NQV DN+
Sbjct: 50 GLANKKTVAIQPGGKDLSVVLATSKTKKQNKPGNLYNRSVMKKEFRKMAKAVKNQVTDNY 109
Query: 363 YRPDLKKAALARLSVVYRSLKVSKSGAKKRNRQAVRM 253
YRPDL KAALARLS V+RSLKV+KSG KKRNRQAV++
Sbjct: 110 YRPDLTKAALARLSAVHRSLKVAKSGVKKRNRQAVQV 146
>gi|118481531|gb|ABK92708.1| unknown [Populus trichocarpa]
Length = 147
Score = 149 bits (375), Expect = 3e-034
Identities = 75/97 (77%), Positives = 86/97 (88%)
Frame = -1
Query: 543 GLANKKTVNIQPGGKDQSVVLATTKTRKQNKPASLVHKSVMRKEFPRMAKAVTNQVVDNF 364
GLANKKTV IQ G KDQ+VVLAT+KT+KQNKPA+L HKSVM+KEF RMAKAV NQV N+
Sbjct: 50 GLANKKTVTIQAGDKDQAVVLATSKTKKQNKPAALFHKSVMKKEFRRMAKAVENQVEGNY 109
Query: 363 YRPDLKKAALARLSVVYRSLKVSKSGAKKRNRQAVRM 253
YRPDLKKAALARLS V+RSLKV+KSG KKRNRQ +++
Sbjct: 110 YRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQGLKI 146
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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