BLASTX 7.6.2
Query= RU02096 /QuerySize=1070
(1069 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15216293|dbj|BAB63261.1| MADS-box protein [Rosa rugosa] 533 1e-149
gi|22775408|dbj|BAC11907.1| MADS-box protein [Malus x domestica] 339 3e-091
gi|16973294|emb|CAC80856.1| B-type MADS box protein [Malus x dom... 334 8e-090
gi|115492982|gb|ABI98021.1| flowering-related B-class MADS-box p... 294 9e-078
gi|147868421|gb|ABQ51322.1| B-class MADS-box protein TM6-2 [Cari... 285 4e-075
>gi|15216293|dbj|BAB63261.1| MADS-box protein [Rosa rugosa]
Length = 261
Score = 533 bits (1372), Expect = 1e-149
Identities = 260/261 (99%), Positives = 261/261 (100%)
Frame = +2
Query: 65 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP 244
MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP
Sbjct: 1 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP 60
Query: 245 TTTTKKMFDLYQKNLQIDLWNSHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE 424
TTTTKKMFDLYQKNLQIDLW+SHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE
Sbjct: 61 TTTTKKMFDLYQKNLQIDLWSSHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE 120
Query: 425 LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGYGAPGNEDPQYGY 604
LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGYGAPGNEDPQYGY
Sbjct: 121 LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGYGAPGNEDPQYGY 180
Query: 605 VDNEGDYESAVALANGASNLYFFNRVHNNHNLDHGHGGGSLVSSITHLQNPNNHGNHNLE 784
VDNEGDYESAVALANGASNLYFFNRVHNNHNLDHGHGGGSLVSSITHLQNPNNHGNHNLE
Sbjct: 181 VDNEGDYESAVALANGASNLYFFNRVHNNHNLDHGHGGGSLVSSITHLQNPNNHGNHNLE 240
Query: 785 NGHGGGSLISSITHLHDLRLA 847
NGHGGGSLISSITHLHDLRLA
Sbjct: 241 NGHGGGSLISSITHLHDLRLA 261
>gi|22775408|dbj|BAC11907.1| MADS-box protein [Malus x domestica]
Length = 237
Score = 339 bits (868), Expect = 3e-091
Identities = 169/234 (72%), Positives = 194/234 (82%), Gaps = 5/234 (2%)
Frame = +2
Query: 65 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP 244
MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDA+VSLIM S+T K+HEYISP
Sbjct: 1 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMLSNTSKMHEYISP 60
Query: 245 TTTTKKMFDLYQKNLQIDLWNSHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE 424
TTTTK M+D YQK + IDLW +HYE+MK+ LWKLKE+NNKLRR+IRQRLGHDLNGLSY +
Sbjct: 61 TTTTKSMYDDYQKTMGIDLWRTHYESMKDTLWKLKEINNKLRREIRQRLGHDLNGLSYDD 120
Query: 425 LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGYGAPGNEDPQYGY 604
L+ LE+ M S+ IR+RKYHV+KTQ ETT+KKVKNLEER N++HGY A +E+PQY Y
Sbjct: 121 LRSLEDKMQSSLDAIRERKYHVIKTQTETTKKKVKNLEERRGNMLHGYEA-ASENPQYCY 179
Query: 605 VDNEGDYESAVALANGASNLYFFNRVHNNHNLD----HGHGGGSLVSSITHLQN 754
VDNEGDYESA+ LANGA+NLY F N+ L H H G SL SSITHL +
Sbjct: 180 VDNEGDYESALVLANGANNLYTFQLHRNSDQLHHPNLHHHRGSSLGSSITHLHD 233
>gi|16973294|emb|CAC80856.1| B-type MADS box protein [Malus x domestica]
Length = 232
Score = 334 bits (856), Expect = 8e-090
Identities = 166/232 (71%), Positives = 192/232 (82%), Gaps = 6/232 (2%)
Frame = +2
Query: 65 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP 244
MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDA+VSLIM S+T+K+HEYISP
Sbjct: 1 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMLSNTNKMHEYISP 60
Query: 245 TTTTKKMFDLYQKNLQIDLWNSHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE 424
TTTTK M+D YQK + IDLW +H E+MK+ LWKLKE+NNKLRR+IRQRLGHDLNGLS+ E
Sbjct: 61 TTTTKSMYDDYQKTMGIDLWRTHEESMKDTLWKLKEINNKLRREIRQRLGHDLNGLSFDE 120
Query: 425 LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGY--GAPGNEDPQY 598
L L++ M S+ IR RKYHV+KTQ ETT+KKVKNLE+R N++HGY EDPQY
Sbjct: 121 LASLDDEMQSSLDAIRQRKYHVIKTQTETTKKKVKNLEQRRGNMLHGYFDQEAAGEDPQY 180
Query: 599 GYVDNEGDYESAVALANGASNLYFFNRVHNNHNLDHGHGGGSLVSSITHLQN 754
GY DNEGDYESA+AL+NGA+NLY F+ H N + HGG SL SSITHL +
Sbjct: 181 GYEDNEGDYESALALSNGANNLYTFHLHHRNLH----HGGSSLGSSITHLHD 228
>gi|115492982|gb|ABI98021.1| flowering-related B-class MADS-box protein [Vitis
vinifera]
Length = 225
Score = 294 bits (752), Expect = 9e-078
Identities = 152/221 (68%), Positives = 178/221 (80%), Gaps = 3/221 (1%)
Frame = +2
Query: 65 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP 244
MGRGKIEIK IEN TNRQVTYSKRRNGIFKKAQELTVLCDA+VSLIM S+T K HEY SP
Sbjct: 1 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNTGKFHEYTSP 60
Query: 245 TTTTKKMFDLYQKNLQIDLWNSHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE 424
T TTKK++D YQK L IDLW+SHYE M+ENL KLKE+NNKLRR+IRQR+G DL LS +
Sbjct: 61 TITTKKVYDQYQKTLGIDLWSSHYERMQENLRKLKEINNKLRREIRQRMGEDLGDLSIED 120
Query: 425 LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGYGAPGNEDPQYGY 604
L+ LE+ M S+ ++R+RKYHV+KTQ ET RKKV+NLEE++ NL+ + A +DP YG
Sbjct: 121 LRGLEQKMDASLGLVRERKYHVIKTQTETYRKKVRNLEEQHGNLLLNFEAK-CDDPHYGL 179
Query: 605 VDNEGDYESAVALANGASNLYFFNRVHNNH-NLDHGHGGGS 724
V+N+GDYESAVA ANGASNLY F R+H H NL H G GS
Sbjct: 180 VENDGDYESAVAFANGASNLYAF-RLHQAHPNLHHDGGYGS 219
>gi|147868421|gb|ABQ51322.1| B-class MADS-box protein TM6-2 [Carica papaya]
Length = 227
Score = 285 bits (729), Expect = 4e-075
Identities = 139/219 (63%), Positives = 178/219 (81%), Gaps = 1/219 (0%)
Frame = +2
Query: 65 MGRGKIEIKLIENQTNRQVTYSKRRNGIFKKAQELTVLCDAQVSLIMQSSTDKIHEYISP 244
MGRGKIEIK IEN TNRQVTYSKRRNGIFKKAQELTVLCDA+VSLIM S+T K+HE+ISP
Sbjct: 1 MGRGKIEIKRIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMISNTGKLHEFISP 60
Query: 245 TTTTKKMFDLYQKNLQIDLWNSHYEAMKENLWKLKEVNNKLRRDIRQRLGHDLNGLSYAE 424
T TTKKM D YQ L +DLW++HY+ M++NL KL+E+NNKLRR+IRQR G DL+ S E
Sbjct: 61 TATTKKMIDQYQSTLGVDLWSTHYQKMQDNLKKLREINNKLRREIRQRSGEDLHDASVEE 120
Query: 425 LQDLEETMSQSVQIIRDRKYHVLKTQAETTRKKVKNLEERNSNLMHGYGAPGNEDPQYGY 604
L+ LE+ M+ ++++IR+RK+H +KTQ +T +KKV+NLEE+N NL+ + + DP YG
Sbjct: 121 LRGLEQNMASALEVIRERKFHTIKTQTDTYKKKVRNLEEQNGNLLLKFETRYHGDPHYGL 180
Query: 605 VDNEGDYESAVALANGASNLYFFNRVHNNHNLDHGHGGG 721
++NE DYESA+ALANGASNL+ F R+H+NH+ + H GG
Sbjct: 181 IENERDYESAIALANGASNLHAF-RLHHNHHPNDLHLGG 218
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,402,855,968
Number of Sequences: 7387702
Number of Extensions: 60402855968
Number of Successful Extensions: 33472321
Number of sequences better than 0.0: 0
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