BLASTX 7.6.2
Query= RU02141 /QuerySize=705
(704 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|439487|dbj|BAA05076.1| zinc-finger DNA binding protein [Petun... 127 9e-028
gi|439489|dbj|BAA05077.1| zinc-finger DNA binding protein [Petun... 123 2e-026
gi|1763063|gb|AAB39638.1| SCOF-1 [Glycine max] 97 8e-019
gi|4666360|gb|AAD26942.1|AF119050_1 zinc-finger protein 1 [Datis... 86 2e-015
gi|7228329|emb|CAB77055.1| putative TFIIIA (or kruppel)-like zin... 77 1e-012
>gi|439487|dbj|BAA05076.1| zinc-finger DNA binding protein [Petunia x hybrida]
Length = 277
Score = 127 bits (318), Expect = 9e-028
Identities = 82/187 (43%), Positives = 100/187 (53%), Gaps = 14/187 (7%)
Frame = +2
Query: 152 ALEALNSPTAAGQGF---HYDEPKLQYSEPWTKRKRSKRPRSVEQTQVSEEEYLALCLIM 322
ALEAL SPTAA + D+ + + W K KRSKRPR +T SEEEYLALCLIM
Sbjct: 2 ALEALKSPTAATPTLPPRYEDQVDMSNLDSWVKGKRSKRPRI--ETPPSEEEYLALCLIM 59
Query: 323 LARGGHSGGPITAAASHRSQSPVPSVSPVIEQATSAPAKENQLPSYKCSVCDKTFPSYQA 502
LAR G+ P + S + + S P + AP + SYKCSVCDK+F SYQA
Sbjct: 60 LARSGNGTTPSSIPGS--TDTTTISKEPEKKNRDVAPVYQETEQSYKCSVCDKSFSSYQA 117
Query: 503 LGGHKASHRKGGLPPSPAAKDPPRHPPPPPHPPP-------TSPTPPVGPHECSICHKSF 661
LGGHKASHRK + A D + P + ++ P H CSICHK+F
Sbjct: 118 LGGHKASHRKITTIATTALLDDNNNNPTTSNSTNGNVVNNISTLNPSGRSHVCSICHKAF 177
Query: 662 PHRPGLG 682
P LG
Sbjct: 178 PSGQALG 184
>gi|439489|dbj|BAA05077.1| zinc-finger DNA binding protein [Petunia x hybrida]
Length = 274
Score = 123 bits (307), Expect = 2e-026
Identities = 80/186 (43%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Frame = +2
Query: 155 LEALNSPTAAGQGF---HYDEPKLQYSEPWTKRKRSKRPRSVEQTQVSEEEYLALCLIML 325
LEAL SPTAA + D + + W K KRSKRPR +T SEEEYLALCLIML
Sbjct: 3 LEALKSPTAATPSLPPRYEDHVDMNNLDSWVKGKRSKRPRI--ETPPSEEEYLALCLIML 60
Query: 326 ARGGHSGGPITAAASHRSQSPVPSVSPVIEQATSAPAKENQLPSYKCSVCDKTFPSYQAL 505
AR SG T ++ + + S P + P + SYKCSVCDK+F SYQAL
Sbjct: 61 AR---SGNGTTPGSTDTTITTTISKEPEKKNRELTPVHQETEQSYKCSVCDKSFSSYQAL 117
Query: 506 GGHKASHRKGGLPPSPAAKDPPRHPPPPPHPPP-------TSPTPPVGPHECSICHKSFP 664
GGHKASHRK + A D + P + ++ P H CSICHK+FP
Sbjct: 118 GGHKASHRKITTIATTALLDDNNNNPTTSNSTSGNVVNNISALNPSGRSHVCSICHKAFP 177
Query: 665 HRPGLG 682
LG
Sbjct: 178 TGQALG 183
>gi|1763063|gb|AAB39638.1| SCOF-1 [Glycine max]
Length = 240
Score = 97 bits (241), Expect = 8e-019
Identities = 58/116 (50%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Frame = +2
Query: 356 TAAASHRSQSPVPSVSPVIEQATSAPAKENQLPSYKCSVCDKTFPSYQALGGHKASHRKG 535
T ++R SP P+ Q P +L SYKCSVCDK+FPSYQALGGHKASHRK
Sbjct: 56 TTTVNNRHVSP----PPLQPQPQPTPDPSTKL-SYKCSVCDKSFPSYQALGGHKASHRK- 109
Query: 536 GLPPSPAAKDPPRHPPPPPHPPPTSPTPPVGPHECSICHKSFPHRPGLGRHKRCHY 703
+ AA+D P TS HECSICHKSFP LG HKRCHY
Sbjct: 110 ---LAGAAEDQP-PSTTTSSAAATSSASGGKAHECSICHKSFPTGQALGGHKRCHY 161
>gi|4666360|gb|AAD26942.1|AF119050_1 zinc-finger protein 1 [Datisca glomerata]
Length = 247
Score = 86 bits (211), Expect = 2e-015
Identities = 44/62 (70%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Frame = +2
Query: 149 MALEALNSPTAAGQGFHYDEPKLQYSEPWTKRKRSKRPRSVEQTQVSEEEYLALCLIMLA 328
MALEALNSPT A FHYD+P L Y EPWTKRKRSKR R + +EEEYLA CLIMLA
Sbjct: 1 MALEALNSPTTATPVFHYDDPSLNYLEPWTKRKRSKRTRL--DSPHTEEEYLAFCLIMLA 58
Query: 329 RG 334
RG
Sbjct: 59 RG 60
>gi|7228329|emb|CAB77055.1| putative TFIIIA (or kruppel)-like zinc finger
protein [Medicago sativa subsp. x varia]
Length = 235
Score = 77 bits (187), Expect = 1e-012
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Frame = +2
Query: 149 MALEALNSPTAAGQGFHYDEPKLQYSE-PWTKRKRSKRPRSVEQTQVSEEEYLALCLIML 325
MA+EALNSPT A ++EP L Y E PWTK KRSKR R ++Q+ +EEEYLALCLIML
Sbjct: 1 MAMEALNSPTTATPFTPFEEPNLSYLETPWTKGKRSKRSR-MDQSSCTEEEYLALCLIML 59
Query: 326 ARGGHS 343
AR G++
Sbjct: 60 ARSGNN 65
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,154,974,321
Number of Sequences: 7387702
Number of Extensions: 67154974321
Number of Successful Extensions: 40677446
Number of sequences better than 0.0: 0
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