BLASTX 7.6.2
Query= RU02186 /QuerySize=1803
(1802 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147839912|emb|CAN65906.1| hypothetical protein [Vitis vinifera] 955 2e-276
gi|147773643|emb|CAN76464.1| hypothetical protein [Vitis vinifera] 945 3e-273
gi|157345168|emb|CAO71896.1| unnamed protein product [Vitis vini... 932 2e-269
gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nic... 918 3e-265
gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Da... 906 2e-261
>gi|147839912|emb|CAN65906.1| hypothetical protein [Vitis vinifera]
Length = 648
Score = 955 bits (2467), Expect = 2e-276
Identities = 471/578 (81%), Positives = 513/578 (88%), Gaps = 8/578 (1%)
Frame = +3
Query: 36 QVQGQNANAAAAAAAAAAANGGGANQFVTTSLYVGDLDQNITDSQLYDLFNQLGQVVSVR 215
QVQ Q A AA G G NQFVTTSLYVGDL+ N+ DSQLYDLF+Q+G VVSVR
Sbjct: 6 QVQPQGPGPAPNGAA-----GAGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVR 60
Query: 216 VCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPVNGRPIRIMYSHRDPSIRKSGSGNI 395
VCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTP+NG+PIRIMYSHRDPSIRKSG+GNI
Sbjct: 61 VCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNI 120
Query: 396 FIKNLDKALDHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQFDNEEAAQKAIAKLNG 575
FIKNLDK +DHKALHDTFS+FGNILSCKVATD+SG SKG+GFVQFD+EEAAQKAI KLNG
Sbjct: 121 FIKNLDKGIDHKALHDTFSAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNG 180
Query: 576 MLINDKQVFVGPFLRKQEREGVADKSKFQNVYVKNLSESTTEDDFTKIFGEFGPITSVVI 755
ML+NDKQVFVGPF+RKQERE +K KF NV+VKN+SE TE+D T+IFGEFGPITSVV+
Sbjct: 181 MLLNDKQVFVGPFVRKQERESTINKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVV 240
Query: 756 MRDQDGKSKCFGFVNFDNPDDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKLRFEQ 935
MRD DGKSKCFGFVNF+N DDAA +VEALNG+KFDDKEWYVGKAQKKSERE ELK RFEQ
Sbjct: 241 MRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQ 300
Query: 936 SMKEAADKYQGANLYVKNLDDSIVDDKLKELFTPFGTITSCKVMRDPNGVSRGSGFVAFS 1115
+MKEA DK+QGANLY+KNLDDSI DDKLKELF FGTITSCKVMRDPNG+SRGSGFVAFS
Sbjct: 301 NMKEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFS 360
Query: 1116 TPEEANRALAEMNGKMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVAPRMPMY 1295
+PEEA+RALAEMN KM+VSKPLYVALAQRKEDRRARLQAQFSQMRPV M PSV PR+PMY
Sbjct: 361 SPEEASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMRPVPMPPSVVPRLPMY 420
Query: 1296 PPGGPGIGQQIFYGQAPPAIIPSQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQR 1475
PP GPG+GQQ+FYGQAPPAIIP QPGFGYQQQLVPGMRP G PMPNFFVP+VQQGQQGQR
Sbjct: 421 PPSGPGLGQQMFYGQAPPAIIPPQPGFGYQQQLVPGMRPAGPPMPNFFVPIVQQGQQGQR 480
Query: 1476 PGGRRAG--PAQQNQQPVPLMQQQMLPRGRIYRYPSGRALPDGPMPGV-GGMFSVPYDLS 1646
PGGRRAG P QQ QQ VPLMQQQMLPRGR++RYP GR L D PMPGV GGM SVPYD+
Sbjct: 481 PGGRRAGAVPMQQTQQQVPLMQQQMLPRGRVFRYPPGRGLSDVPMPGVAGGMVSVPYDMG 540
Query: 1647 GMPLRDPALSQPVPIGTLASALANATPEQQRTMLGETL 1760
GMPL D A+SQ +P+G LA+ALANA P +QRTMLGE L
Sbjct: 541 GMPLHDAAISQSIPVGALATALANAPPAEQRTMLGENL 578
>gi|147773643|emb|CAN76464.1| hypothetical protein [Vitis vinifera]
Length = 640
Score = 945 bits (2441), Expect = 3e-273
Identities = 470/564 (83%), Positives = 509/564 (90%), Gaps = 6/564 (1%)
Frame = +3
Query: 78 AAAAANGGGANQFVTTSLYVGDLDQNITDSQLYDLFNQLGQVVSVRVCRDLSTRRSLGYG 257
AA A G AN T SLYVGDLD NITDSQLYDLF Q GQV+SVRVCRDLSTRRSLGYG
Sbjct: 6 AAVAGPNGVAN---TASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYG 62
Query: 258 YVNYSNPQDAARALDVLNFTPVNGRPIRIMYSHRDPSIRKSGSGNIFIKNLDKALDHKAL 437
YVNYSNPQDAARALD+LNFTP+NG+PIRIMYSHRDPSIRKSG+ NIFIKNLDK++D+KAL
Sbjct: 63 YVNYSNPQDAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKAL 122
Query: 438 HDTFSSFGNILSCKVATDSSGQSKGYGFVQFDNEEAAQKAIAKLNGMLINDKQVFVGPFL 617
HDTFS+FGNILSCK+ATD SGQSKGYGFVQFDNEE+AQ AI KLNGMLINDKQV+VG FL
Sbjct: 123 HDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFL 182
Query: 618 RKQEREGVADKSKFQNVYVKNLSESTTEDDFTKIFGEFGPITSVVIMRDQDGKSKCFGFV 797
RKQERE +K+KF NVYVKNLSESTTE+D IFGEFG ITSVV+MRD DGKSKCFGFV
Sbjct: 183 RKQERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFV 242
Query: 798 NFDNPDDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKLRFEQSMKEAADKYQGANL 977
NF+N DDAA AVEALNGKKFD+KEWYVGKAQKK ERE ELK RFEQSMKE DK+QG NL
Sbjct: 243 NFENADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNL 302
Query: 978 YVKNLDDSIVDDKLKELFTPFGTITSCKVMRDPNGVSRGSGFVAFSTPEEANRALAEMNG 1157
Y+KNLDDSI DDKLKELF+ FGTITSCKVMRDP+G+SRGSGFVAFST EEA+RAL EMNG
Sbjct: 303 YIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNG 362
Query: 1158 KMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVAPRMPMYPPGGPGIGQQIFYG 1337
KM+VSKPLYVALAQRKE+RRARLQAQFSQMRPV+MAPSVAPRMPMYPPG PG+GQQ+FYG
Sbjct: 363 KMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPMYPPGAPGLGQQLFYG 422
Query: 1338 QAPPAIIPSQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRR-AGPAQQNQ 1514
Q PPAIIP Q GFGYQQQLVPGMRPGGAPMPNFFVP+VQQGQQGQRPGGRR AGP QQNQ
Sbjct: 423 QGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQRPGGRRGAGPVQQNQ 482
Query: 1515 QPVPLMQQQMLPR-GRIYRYPSGRALPDGPMPGV-GGMFSVPYDLSGMPLRDPALSQPVP 1688
QPVPLMQQQMLPR GR+YRYP GR +PD PMPGV GGM S+PYD+ G+PLRD A+ QP+P
Sbjct: 483 QPVPLMQQQMLPRGGRVYRYPPGRNMPDVPMPGVAGGMLSIPYDMGGVPLRDAAIGQPMP 542
Query: 1689 IGTLASALANATPEQQRTMLGETL 1760
I LASALANATP+QQRTMLGE+L
Sbjct: 543 ISALASALANATPDQQRTMLGESL 566
>gi|157345168|emb|CAO71896.1| unnamed protein product [Vitis vinifera]
Length = 654
Score = 932 bits (2407), Expect = 2e-269
Identities = 457/580 (78%), Positives = 511/580 (88%), Gaps = 5/580 (0%)
Frame = +3
Query: 30 QAQVQGQNANAAAAAAAAAAANGGGANQFVTTSLYVGDLDQNITDSQLYDLFNQLGQVVS 209
Q QVQ Q A +AA A+NGGG NQFV+TSLYVGDL+ N+TDS LYDLF QLG VVS
Sbjct: 3 QVQVQAQ-AQPPVSAANGGASNGGG-NQFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVS 60
Query: 210 VRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPVNGRPIRIMYSHRDPSIRKSGSG 389
VRVCRDLSTRRSLGYGYVNY N QDAARALD+LNFTP+NG+PIRIMYS RDPSIR+SG+
Sbjct: 61 VRVCRDLSTRRSLGYGYVNYGNTQDAARALDMLNFTPLNGKPIRIMYSFRDPSIRRSGTA 120
Query: 390 NIFIKNLDKALDHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQFDNEEAAQKAIAKL 569
NIFIKNLDKA+D+KAL+DTFS+FG ILSCK+ATD+SGQSKGYGFVQFDNEE+A+ A KL
Sbjct: 121 NIFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKL 180
Query: 570 NGMLINDKQVFVGPFLRKQEREGVADKSKFQNVYVKNLSESTTEDDFTKIFGEFGPITSV 749
NGML+NDKQV+VGPF+RKQERE +K+KF NVYVKNL ESTT++D IFGE+GPITS
Sbjct: 181 NGMLLNDKQVYVGPFVRKQERESATNKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSA 240
Query: 750 VIMRDQDGKSKCFGFVNFDNPDDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKLRF 929
V+M+D DGKSKCFGFVNF+N DDAAR+VEALNGKKFDDKEWYVGKAQKK+ERE ELK RF
Sbjct: 241 VVMQDGDGKSKCFGFVNFENADDAARSVEALNGKKFDDKEWYVGKAQKKTEREVELKGRF 300
Query: 930 EQSMKEAADKYQGANLYVKNLDDSIVDDKLKELFTPFGTITSCKVMRDPNGVSRGSGFVA 1109
EQS+KEA DK+QG NLYVKNLDDSI DDKL+ELF+ FGTITSCKVMRDPNG+SRGSGFVA
Sbjct: 301 EQSLKEAVDKFQGLNLYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVA 360
Query: 1110 FSTPEEANRALAEMNGKMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVAPRMP 1289
FST EEA+RALA+MNGKM+ SKPLYVALAQRKEDRRARLQAQFSQMRP AMAPSV PRM
Sbjct: 361 FSTAEEASRALADMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMRPAAMAPSVGPRMS 420
Query: 1290 MYPPGGPGIGQQIFYGQAPPAIIPSQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQG 1469
MYPPG PG+GQQ+FYGQ PPA+IP QPGFGYQ QLVPGMRPG APMPNFFVPMVQ GQ
Sbjct: 421 MYPPGAPGLGQQLFYGQGPPALIPPQPGFGYQHQLVPGMRPGAAPMPNFFVPMVQPGQPN 480
Query: 1470 QRPGGRRA--GPAQQNQQPVPLMQQQMLPRGRIYRYPSGRALPDGPMPGV-GGMFSVPYD 1640
QRPGGRR+ GP QQ QQP+PLMQQQMLPRGR+YRYP GR + D P+PGV GGM S PYD
Sbjct: 481 QRPGGRRSGTGPVQQTQQPLPLMQQQMLPRGRVYRYPPGRNMADVPIPGVPGGMLSAPYD 540
Query: 1641 LSGMPLRDPALSQPVPIGTLASALANATPEQQRTMLGETL 1760
++GMP RD A+SQP+PIG LA+ALANA P+QQRT+LGE L
Sbjct: 541 MAGMPFRDAAVSQPMPIGALATALANAPPDQQRTLLGENL 580
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana
tabacum]
Length = 649
Score = 918 bits (2371), Expect = 3e-265
Identities = 442/559 (79%), Positives = 502/559 (89%), Gaps = 3/559 (0%)
Frame = +3
Query: 93 NGGGANQFVTTSLYVGDLDQNITDSQLYDLFNQLGQVVSVRVCRDLSTRRSLGYGYVNYS 272
N GG N TSLYVGDLD N+TDSQLYDLFNQLGQVVSVRVCRDL+++RSLGYGYVNY
Sbjct: 17 NAGGVNNQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYG 76
Query: 273 NPQDAARALDVLNFTPVNGRPIRIMYSHRDPSIRKSGSGNIFIKNLDKALDHKALHDTFS 452
NPQDAARAL+VLNFTP++G+PIRIMYS+RDP+IR+SG+GNIFIKNLDKA+DHKALHDTFS
Sbjct: 77 NPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDHKALHDTFS 136
Query: 453 SFGNILSCKVATDSSGQSKGYGFVQFDNEEAAQKAIAKLNGMLINDKQVFVGPFLRKQER 632
+FGNILSCKVA DSSGQSKGYGFVQ+D+EEAAQKAI KLNGML+NDKQV+VGPF+RK ER
Sbjct: 137 AFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHER 196
Query: 633 EGVADKSKFQNVYVKNLSESTTEDDFTKIFGEFGPITSVVIMRDQDGKSKCFGFVNFDNP 812
+ DK++F NV+VKNLSEST E++ KIFGEFG ITSV +M+D+DGKS+CFGFVNF+N
Sbjct: 197 DMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENA 256
Query: 813 DDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKLRFEQSMKEAADKYQGANLYVKNL 992
+DAARAVEALNG K D+K+W+VG+AQKKSERE ELK RFEQS KEA DK QG NLY+KNL
Sbjct: 257 EDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNL 316
Query: 993 DDSIVDDKLKELFTPFGTITSCKVMRDPNGVSRGSGFVAFSTPEEANRALAEMNGKMIVS 1172
DDSI D+KLKELF+P+GTITSCKVMRDP+GVS+GSGFVAFS PEEA+RAL+EMNGKM+VS
Sbjct: 317 DDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMVVS 376
Query: 1173 KPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVAPRMPMYPPGGPGIGQQIFYGQAPPA 1352
KPLYVALAQRKE+RRARLQAQFSQMRP+AMA SVAPRMPMYPPGGPG+GQQIFYGQ PA
Sbjct: 377 KPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGGPGLGQQIFYGQPQPA 436
Query: 1353 IIPSQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRAG--PAQQNQQPVP 1526
++P Q GFGYQQQLVPGMRPGG PMPNFF+PMVQQGQQGQRPGGRR G P QQ QQPVP
Sbjct: 437 MLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGGAVPLQQGQQPVP 496
Query: 1527 LMQQQMLPRGRIYRYPSGRALPDGPMPGV-GGMFSVPYDLSGMPLRDPALSQPVPIGTLA 1703
LMQQQM PRGR YRYP GR LPD PGV GGMFS+PYD+ GMP+RD + QP+P+G LA
Sbjct: 497 LMQQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFSIPYDMGGMPVRDAGIVQPIPVGALA 556
Query: 1704 SALANATPEQQRTMLGETL 1760
+ALAN++P +QRTMLGE L
Sbjct: 557 TALANSSPTEQRTMLGENL 575
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 906 bits (2339), Expect = 2e-261
Identities = 447/587 (76%), Positives = 509/587 (86%), Gaps = 8/587 (1%)
Frame = +3
Query: 24 MAQAQVQGQN------ANAAAAAAAAAAANGGGANQFVTTSLYVGDLDQNITDSQLYDLF 185
MAQ QVQ Q + + +A AAAN GG+NQF TTSLYVGDLDQ++TDSQLYDLF
Sbjct: 1 MAQIQVQPQQQQQQIPVSGSNGVSAGAAANAGGSNQFTTTSLYVGDLDQSVTDSQLYDLF 60
Query: 186 NQLGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPVNGRPIRIMYSHRDP 365
NQ+GQVVSVRVCRDLST RSLGYGYVNYSN QDA RA+DVLNFTP+N + IR+ S RDP
Sbjct: 61 NQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDVLNFTPLNNKTIRVSVSRRDP 120
Query: 366 SIRKSGSGNIFIKNLDKALDHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQFDNEEA 545
+ RKSG+GNIFIKNLDK++D KALH+TFSSFG I+SCK+ATD+SGQSKGYGFVQ+D+EEA
Sbjct: 121 TDRKSGAGNIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEEA 180
Query: 546 AQKAIAKLNGMLINDKQVFVGPFLRKQEREGVADKSKFQNVYVKNLSESTTEDDFTKIFG 725
AQ AI KLNGML+NDKQV+VG FLRKQ+R+ K+KF N+YVKNLS+ST+EDD K FG
Sbjct: 181 AQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFG 240
Query: 726 EFGPITSVVIMRDQDGKSKCFGFVNFDNPDDAARAVEALNGKKFDDKEWYVGKAQKKSER 905
E+G ITSVV+MRD DGKSKCFGFVNF+NP+DAA+AV+ALNGKKFDDKEWYVGKAQKKSER
Sbjct: 241 EYGTITSVVVMRDADGKSKCFGFVNFENPEDAAKAVDALNGKKFDDKEWYVGKAQKKSER 300
Query: 906 ENELKLRFEQSMKEAADKYQGANLYVKNLDDSIVDDKLKELFTPFGTITSCKVMRDPNGV 1085
E ELK RFEQ++KE DKYQG NLYVKNLDD+I D+KLKELF+ +GTITSCKVMRDP+G+
Sbjct: 301 EVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGI 360
Query: 1086 SRGSGFVAFSTPEEANRALAEMNGKMIVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMA 1265
SRGSGFVAFSTPEEA+RAL EMNGKMIVSKPLYVALAQRKE+RRARLQAQFSQMRPVAM
Sbjct: 361 SRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMP 420
Query: 1266 PSVAPRMPMYPPGGPGIGQQIFYGQAPPAIIPSQPGFGYQQQLVPGMRPGGAPMPNFFVP 1445
PS+ PRMPMY PG PG+GQQ+FYGQAPPA+I Q GFGYQQQLVPGMRPGG PMPNFF+P
Sbjct: 421 PSMGPRMPMYSPGAPGMGQQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMP 480
Query: 1446 MVQQGQQGQRPGGRR-AGPAQQNQQPVPLMQQQMLPRGRIYRYPSGRALPDGPMPGV-GG 1619
MVQQGQQGQRPGGRR AGPAQQ QQPVP+M QQ++PRGR+YR+P GR + D MPGV GG
Sbjct: 481 MVQQGQQGQRPGGRRGAGPAQQTQQPVPMMPQQLMPRGRMYRFPPGRNVGDVTMPGVGGG 540
Query: 1620 MFSVPYDLSGMPLRDPALSQPVPIGTLASALANATPEQQRTMLGETL 1760
M VPY++ GM R+ A+ QP+PI LASALANA +QQRTMLGE L
Sbjct: 541 MLPVPYNMGGMLPREAAMGQPMPITALASALANAPADQQRTMLGENL 587
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,154,974,321
Number of Sequences: 7387702
Number of Extensions: 67154974321
Number of Successful Extensions: 40677446
Number of sequences better than 0.0: 0
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