Blast details for RU02210 (GenBank)


BLASTX 7.6.2

Query= RU02210 /QuerySize=561
        (560 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|157346196|emb|CAO15893.1| unnamed protein product [Vitis vini...    154   4e-036
gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]              152   2e-035
gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G, ...    150   6e-035
gi|147806402|emb|CAN67622.1| hypothetical protein [Vitis vinifera]     150   8e-035
gi|194694128|gb|ACF81148.1| unknown [Zea mays]                         149   2e-034

>gi|157346196|emb|CAO15893.1| unnamed protein product [Vitis vinifera]

          Length = 80

 Score =  154 bits (388), Expect = 4e-036
 Identities = 75/80 (93%), Positives = 80/80 (100%)
 Frame = -3

Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
           MSRSGQPPDLKKYMDKKLQIKLNANRM++GTLRGFDQFMNLVVDNTVEVNG+EKTDIGMV
Sbjct:   1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 288 VIRGNSVVTVEALEPVAKMQ 229
           VIRGNSVVTVEALEPV++MQ
Sbjct:  61 VIRGNSVVTVEALEPVSRMQ 80

>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]

          Length = 80

 Score =  152 bits (382), Expect = 2e-035
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = -3

Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
           MSRSGQPPDLKKYMDKKLQIKLNANRM++GTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV
Sbjct:   1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 288 VIRGNSVVTVEALEPVAKMQ 229
           V+RGNSVVTVEALEPV + Q
Sbjct:  61 VLRGNSVVTVEALEPVNRAQ 80

>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G, putative /
        snRNP-G, putative / Sm protein G, putative [Arabidopsis thaliana]

          Length = 79

 Score =  150 bits (378), Expect = 6e-035
 Identities = 72/78 (92%), Positives = 77/78 (98%)
 Frame = -3

Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
           MSRSGQPPDLKKYMDKKLQIKLNANRM++GTLRGFDQFMNLVVDNTVEVNGD+KTDIGMV
Sbjct:   1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDDKTDIGMV 60

Query: 288 VIRGNSVVTVEALEPVAK 235
           VIRGNS+VTVEALEPV +
Sbjct:  61 VIRGNSIVTVEALEPVGR 78

>gi|147806402|emb|CAN67622.1| hypothetical protein [Vitis vinifera]

          Length = 148

 Score =  150 bits (377), Expect = 8e-035
 Identities = 76/98 (77%), Positives = 84/98 (85%), Gaps = 4/98 (4%)
 Frame = -3

Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
           MSRSGQPPDLKKYMDKKLQIKLNANRM++GTLRGFDQFMNLVVDNTVEVNG+EKTDIGMV
Sbjct:   1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 288 VIRGNSVVTVEALEPVAKMQ*FLFLNFLSGCRMQRETL 175
           VIRGNSVVTVEALEP      F +L+ +  C ++   L
Sbjct:  61 VIRGNSVVTVEALEPAC----FPYLDNVVXCNVKENVL 94

>gi|194694128|gb|ACF81148.1| unknown [Zea mays]

          Length = 80

 Score =  149 bits (374), Expect = 2e-034
 Identities = 72/80 (90%), Positives = 78/80 (97%)
 Frame = -3

Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
           MSRSGQPPDLKKYMDKKLQIKLNANR++IGTLRGFDQFMNLV+DNTVEVNG++KTDIGMV
Sbjct:   1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNDKTDIGMV 60

Query: 288 VIRGNSVVTVEALEPVAKMQ 229
           VIRGNSVV +EALEPVAK Q
Sbjct:  61 VIRGNSVVMIEALEPVAKSQ 80

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,154,974,321
Number of Sequences: 7387702
Number of Extensions: 67154974321
Number of Successful Extensions: 40677446
Number of sequences better than 0.0: 0