BLASTX 7.6.2
Query= RU02387 /QuerySize=572
(571 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylv... 98 3e-019
gi|147772563|emb|CAN67344.1| hypothetical protein [Vitis vinifera] 84 5e-015
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase,... 82 2e-014
gi|147856126|emb|CAN80290.1| hypothetical protein [Vitis vinifera] 78 3e-013
gi|157359394|emb|CAO67555.1| unnamed protein product [Vitis vini... 76 1e-012
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 98 bits (243), Expect = 3e-019
Identities = 58/101 (57%), Positives = 70/101 (69%), Gaps = 9/101 (8%)
Frame = -1
Query: 286 RFSRRLKEEQSKRHVLVPAAHLPK---SNRHR----HVAVDYNHWNPASPVESGNFHAHF 128
R SRR + EQ + VLV A K SN H+ V+ Y ++ PAS +ESG HA F
Sbjct: 29 RVSRRFR-EQDRLPVLVSAQLQDKTRNSNWHKTASLEVSCSYKNF-PASVLESGGIHAPF 86
Query: 127 DESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQ 5
D++ +LK KSQEIEPYL GRCIYLVGMMGSGKTTVGK+L+Q
Sbjct: 87 DDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQ 127
>gi|147772563|emb|CAN67344.1| hypothetical protein [Vitis vinifera]
Length = 301
Score = 84 bits (206), Expect = 5e-015
Identities = 47/99 (47%), Positives = 67/99 (67%), Gaps = 10/99 (10%)
Frame = -1
Query: 283 FSRRLKEEQSKRHVLVPAAHLPK--SNRHRHVAVD----YNHWNPASPVESGNFHAHFDE 122
FS++L+E+ + P+ SN +HVA++ Y ++ PA +ESG+F DE
Sbjct: 30 FSQKLREQHGHP---ISCHFQPRRTSNWQKHVALEASGSYRNF-PAPILESGSFPPSLDE 85
Query: 121 SYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQ 5
+ +LK KSQEI PY+ GRC+YLVGMMGSGKTT+GKIL++
Sbjct: 86 ALILKNKSQEILPYIDGRCVYLVGMMGSGKTTIGKILSE 124
>gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic;
Flags: Precursor
Length = 300
Score = 82 bits (201), Expect = 2e-014
Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Frame = -1
Query: 301 PEWLARFSRRLKEEQSKRHVLVPAAHL-----PKSNRHRHVAVDYNHWN-PASPVESGNF 140
P L RFS + E+ RH +V + HL S+R + V + N AS +ESG F
Sbjct: 24 PSGLLRFSEKWNEK--PRHRVVVSCHLQPRKAAHSDRRVQLKVSCSPQNVQASVLESGCF 81
Query: 139 HAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQ 5
A DE LK K++E+E YL GRC+YLVGMMG GKTTVG+ILA+
Sbjct: 82 SASIDEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAE 126
>gi|147856126|emb|CAN80290.1| hypothetical protein [Vitis vinifera]
Length = 294
Score = 78 bits (191), Expect = 3e-013
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Frame = -1
Query: 262 EQSKRHVLVPAAHLPKSNRHRHVAV----DYNHWNPASPVESGNFHAHFDESYVLKTKSQ 95
++ +R L+ S+R R V++ Y + A VESGNF+A FD +++LK K Q
Sbjct: 27 QRGRRDKLISLQWRSCSSRQRRVSLGISSHYCKDSQAPAVESGNFYACFDGNWLLKKKGQ 86
Query: 94 EIEPYLKGRCIYLVGMMGSGKTTVGKILAQ 5
E+ L GRCI+LVGMMGSGKTTVGKIL++
Sbjct: 87 EVASNLNGRCIFLVGMMGSGKTTVGKILSE 116
>gi|157359394|emb|CAO67555.1| unnamed protein product [Vitis vinifera]
Length = 278
Score = 76 bits (186), Expect = 1e-012
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = -1
Query: 157 VESGNFHAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQA 2
VESGNF+A FD +++LK K QE+ L GRCI+LVGMMGSGKTTVGKIL++A
Sbjct: 34 VESGNFYACFDGNWLLKKKGQEVASNLNGRCIFLVGMMGSGKTTVGKILSEA 85
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,646,702,351
Number of Sequences: 7387702
Number of Extensions: 73646702351
Number of Successful Extensions: 48733870
Number of sequences better than 0.0: 0
|