BLASTX 7.6.2
Query= RU02749 /QuerySize=716
(715 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18420092|ref|NP_568389.1| RPT6A; ATPase [Arabidopsis thaliana] 350 9e-095
gi|15241241|ref|NP_197500.1| (REGULATORY PARTICLE TRIPLE-A 6A); ... 339 1e-091
gi|6652888|gb|AAF22526.1|AF123395_1 26S proteasome AAA-ATPase su... 338 3e-091
gi|157339607|emb|CAO44148.1| unnamed protein product [Vitis vini... 338 3e-091
gi|158828259|gb|ABW81135.1| unknown [Capsella rubella] 338 3e-091
>gi|18420092|ref|NP_568389.1| RPT6A; ATPase [Arabidopsis thaliana]
Length = 419
Score = 350 bits (896), Expect = 9e-095
Identities = 178/199 (89%), Positives = 188/199 (94%)
Frame = -1
Query: 598 MAAVGVETKPVEALPEDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQ 419
MAAVGV+++ E E+TC+ K AA+K GEGL+ YYLQHIHELQ Q+RQKT+NLNRLEAQ
Sbjct: 1 MAAVGVDSRRPETAMEETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQ 60
Query: 418 RNELNSRVRMLREELQLLQEPGSYVGEVVNVMGKNKVLVKVHPEGKYVVDIDKNIDITKI 239
RNELNSRVRMLREELQLLQEPGSYVGEVV VMGKNKVLVKVHPEGKYVVDIDK+IDITKI
Sbjct: 61 RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120
Query: 238 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 59
TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
Query: 58 IKHPELFESLGIAQPKGVL 2
IKHPELFESLGIAQPKGVL
Sbjct: 181 IKHPELFESLGIAQPKGVL 199
>gi|15241241|ref|NP_197500.1| (REGULATORY PARTICLE TRIPLE-A 6A); ATPase
[Arabidopsis thaliana]
Length = 419
Score = 339 bits (869), Expect = 1e-091
Identities = 173/199 (86%), Positives = 183/199 (91%)
Frame = -1
Query: 598 MAAVGVETKPVEALPEDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQ 419
MAAVGVE +P E+TC+ K AA+K GEGL YYLQH+ ELQ R+K++NLNRLEAQ
Sbjct: 1 MAAVGVEARPPVTAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQ 60
Query: 418 RNELNSRVRMLREELQLLQEPGSYVGEVVNVMGKNKVLVKVHPEGKYVVDIDKNIDITKI 239
RNELNSRVRMLREELQLLQEPGSYVGEVV VMGKNKVLVKVHPEGKYVVDIDK+IDITK+
Sbjct: 61 RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKL 120
Query: 238 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 59
TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
Query: 58 IKHPELFESLGIAQPKGVL 2
IKHPELFESLGIAQPKGVL
Sbjct: 181 IKHPELFESLGIAQPKGVL 199
>gi|6652888|gb|AAF22526.1|AF123395_1 26S proteasome AAA-ATPase subunit RPT6a
[Arabidopsis thaliana]
Length = 405
Score = 338 bits (866), Expect = 3e-091
Identities = 171/184 (92%), Positives = 178/184 (96%)
Frame = -1
Query: 553 EDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLREEL 374
E+TC+ K AA+K GEGL+ YYLQHIHELQ Q+RQKT+NLNRLEAQRNELNSRVRMLREEL
Sbjct: 2 EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREEL 61
Query: 373 QLLQEPGSYVGEVVNVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVL 194
QLLQEPGSYVGEVV VMGKNKVLVKVHPEGKYVVDIDK+IDITKITPSTRVALRNDSYVL
Sbjct: 62 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVL 121
Query: 193 HLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 14
HLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP
Sbjct: 122 HLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 181
Query: 13 KGVL 2
KGVL
Sbjct: 182 KGVL 185
>gi|157339607|emb|CAO44148.1| unnamed protein product [Vitis vinifera]
Length = 420
Score = 338 bits (866), Expect = 3e-091
Identities = 169/187 (90%), Positives = 179/187 (95%)
Frame = -1
Query: 562 ALPEDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLR 383
A+ + C+AK +SK G+GLR YYLQHIH+LQLQVRQK+HNLNRLEAQRN+LNSRVRMLR
Sbjct: 14 AMVGEVCTAKTTSSKQGDGLRQYYLQHIHDLQLQVRQKSHNLNRLEAQRNDLNSRVRMLR 73
Query: 382 EELQLLQEPGSYVGEVVNVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDS 203
EELQLLQEPGSYVGEVV VMGK+KVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDS
Sbjct: 74 EELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDS 133
Query: 202 YVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI 23
YVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI
Sbjct: 134 YVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI 193
Query: 22 AQPKGVL 2
AQPKGVL
Sbjct: 194 AQPKGVL 200
>gi|158828259|gb|ABW81135.1| unknown [Capsella rubella]
Length = 419
Score = 338 bits (865), Expect = 3e-091
Identities = 171/199 (85%), Positives = 183/199 (91%)
Frame = -1
Query: 598 MAAVGVETKPVEALPEDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQ 419
MA +G++ E E+TC+ K AA+K GEGL+ YY QHIHE Q Q+RQKT+NLNRLEAQ
Sbjct: 1 MATIGLDPMRPEIGMEETCNVKGAAAKQGEGLKQYYFQHIHEHQRQLRQKTNNLNRLEAQ 60
Query: 418 RNELNSRVRMLREELQLLQEPGSYVGEVVNVMGKNKVLVKVHPEGKYVVDIDKNIDITKI 239
RNELNSRVRMLREELQLLQEPGSYVGEVV VMGKNKVLVKVHPEGKYVVD+DK+IDITK+
Sbjct: 61 RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDVDKSIDITKL 120
Query: 238 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 59
TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
Query: 58 IKHPELFESLGIAQPKGVL 2
IKHPELFESLGIAQPKGVL
Sbjct: 181 IKHPELFESLGIAQPKGVL 199
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,334,234,355
Number of Sequences: 7387702
Number of Extensions: 80334234355
Number of Successful Extensions: 56304794
Number of sequences better than 0.0: 0
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