BLASTX 7.6.2
Query= RU02894 /QuerySize=818
(817 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|126256295|gb|ABO09801.1| F-box protein [Gossypium hirsutum] 170 1e-040
gi|157345201|emb|CAO71929.1| unnamed protein product [Vitis vini... 170 2e-040
gi|15233744|ref|NP_194152.1| SLY1 (SLEEPY1) [Arabidopsis thaliana] 167 1e-039
gi|21593260|gb|AAM65209.1| unknown [Arabidopsis thaliana] 167 1e-039
gi|147834525|emb|CAN60914.1| hypothetical protein [Vitis vinifera] 164 7e-039
>gi|126256295|gb|ABO09801.1| F-box protein [Gossypium hirsutum]
Length = 162
Score = 170 bits (430), Expect = 1e-040
Identities = 81/140 (57%), Positives = 105/140 (75%), Gaps = 9/140 (6%)
Frame = -1
Query: 814 EDKIEQQQEEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLW 635
+ K+++ +E+E G NLD+NL++EVFKHVDARTL ASCVS+ W +TA+DERLW
Sbjct: 14 DQKLKKIKEDEEPEDTKSGLMNLDENLLYEVFKHVDARTLARASCVSRLWRQTAKDERLW 73
Query: 634 ELICTRHWANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPSPSSLSSLSSSSSSWAAP 455
ELICTRHWANIGCG QQLRSVVL LGGFR+LHS Y+W +KP ++S+S+W+ P
Sbjct: 74 ELICTRHWANIGCGTQQLRSVVLPLGGFRQLHSRYLWTFSKPQ-------AASASAWSPP 126
Query: 454 LKPMVAAKPHASWGRDEVNL 395
++ +KP A WG+DEVNL
Sbjct: 127 --KIINSKPPARWGKDEVNL 144
>gi|157345201|emb|CAO71929.1| unnamed protein product [Vitis vinifera]
Length = 179
Score = 170 bits (429), Expect = 2e-040
Identities = 85/140 (60%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
Frame = -1
Query: 790 EEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWELICTRHW 611
EE+ ++ F NLD++L+FEV KHVDARTL A+CVS+QW +TA DERLWE+ICTRHW
Sbjct: 27 EEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERLWEMICTRHW 86
Query: 610 ANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPSPSSLSSLSS-SSSSWAAPLKPMVAA 434
AN+GCG QQLRSVVLALGGFRRLH+L +WPL K PSS SS S ++SS + P
Sbjct: 87 ANVGCGTQQLRSVVLALGGFRRLHALCLWPLLKSPPSSSSSPSPYTTSSHSPQSSPFSPP 146
Query: 433 KPHASWGRDEVNLS-SLASL 377
K WG+DEV+LS SL S+
Sbjct: 147 KAPTRWGKDEVHLSLSLLSI 166
>gi|15233744|ref|NP_194152.1| SLY1 (SLEEPY1) [Arabidopsis thaliana]
Length = 151
Score = 167 bits (421), Expect = 1e-039
Identities = 75/102 (73%), Positives = 88/102 (86%), Gaps = 6/102 (5%)
Frame = -1
Query: 808 KIEQQQEEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWEL 629
K++ +EEE+ GF+NLD+NL++EV KHVDA+TL M+SCVSK WHKTAQDERLWEL
Sbjct: 21 KMKSTEEEEI------GFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWEL 74
Query: 628 ICTRHWANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPSP 503
ICTRHW NIGCG QLRSVVLALGGFRRLHSLY+WPL+KP+P
Sbjct: 75 ICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLWPLSKPNP 116
>gi|21593260|gb|AAM65209.1| unknown [Arabidopsis thaliana]
Length = 151
Score = 167 bits (421), Expect = 1e-039
Identities = 75/102 (73%), Positives = 88/102 (86%), Gaps = 6/102 (5%)
Frame = -1
Query: 808 KIEQQQEEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWEL 629
K++ +EEE+ GF+NLD+NL++EV KHVDA+TL M+SCVSK WHKTAQDERLWEL
Sbjct: 21 KMKSTEEEEI------GFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWEL 74
Query: 628 ICTRHWANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPSP 503
ICTRHW NIGCG QLRSVVLALGGFRRLHSLY+WPL+KP+P
Sbjct: 75 ICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLWPLSKPNP 116
>gi|147834525|emb|CAN60914.1| hypothetical protein [Vitis vinifera]
Length = 236
Score = 164 bits (415), Expect = 7e-039
Identities = 82/140 (58%), Positives = 101/140 (72%), Gaps = 6/140 (4%)
Frame = -1
Query: 790 EEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWELICTRHW 611
EE+ ++ F NLD++L+FEV KHVDARTL A+CVS+QW +TA DERLWE+ICTRHW
Sbjct: 27 EEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERLWEMICTRHW 86
Query: 610 ANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPSPSSLSSLS----SSSSSWAAPLKPM 443
AN+GCG QQLRSVVLALGGFRRLH+L +WPL + PSS SS S SS S ++P P
Sbjct: 87 ANVGCGTQQLRSVVLALGGFRRLHALCLWPLRESPPSSSSSPSPYTTSSHSPQSSPFSPP 146
Query: 442 V--AAKPHASWGRDEVNLSS 389
V + K WG+DE S+
Sbjct: 147 VVPSKKAPTRWGKDEDQTSA 166
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,334,234,355
Number of Sequences: 7387702
Number of Extensions: 80334234355
Number of Successful Extensions: 56304794
Number of sequences better than 0.0: 0
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