BLASTX 7.6.2
Query= RU03216 /QuerySize=423
(422 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) ... 107 2e-022
gi|18396099|ref|NP_566167.1| 60S ribosomal protein L39 (RPL39B) ... 107 3e-022
gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia ... 103 4e-021
gi|118484124|gb|ABK93945.1| unknown [Populus trichocarpa] 101 1e-020
gi|115449229|ref|NP_001048394.1| Os02g0797200 [Oryza sativa (jap... 99 6e-020
>gi|18417922|ref|NP_567886.1| 60S ribosomal protein L39 (RPL39C) [Arabidopsis
thaliana]
Length = 51
Score = 107 bits (266), Expect = 2e-022
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = +3
Query: 63 MPSHKSLIIKKKLGKKMRQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGF 215
MPSHKS +IKKKLGKKMRQNRPIPHWIRLRTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
>gi|18396099|ref|NP_566167.1| 60S ribosomal protein L39 (RPL39B) [Arabidopsis
thaliana]
Length = 51
Score = 107 bits (265), Expect = 3e-022
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +3
Query: 63 MPSHKSLIIKKKLGKKMRQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGF 215
MPSHKS +IKKKLGKKMRQNRPIP+WIRLRTDNKIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
>gi|209967447|gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii]
Length = 51
Score = 103 bits (255), Expect = 4e-021
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +3
Query: 63 MPSHKSLIIKKKLGKKMRQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGF 215
MPSHK+ +IKKKL KKMRQNRPIPHWIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gi|118484124|gb|ABK93945.1| unknown [Populus trichocarpa]
Length = 51
Score = 101 bits (251), Expect = 1e-020
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +3
Query: 63 MPSHKSLIIKKKLGKKMRQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGF 215
MPSHK+ IKKKL KKMRQNRPIPHWIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gi|115449229|ref|NP_001048394.1| Os02g0797200 [Oryza sativa (japonica
cultivar-group)]
Length = 51
Score = 99 bits (245), Expect = 6e-020
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = +3
Query: 63 MPSHKSLIIKKKLGKKMRQNRPIPHWIRLRTDNKIRYNAKRRHWRRTKLGF 215
MPSHK+ IKKKL KKMRQNRPIP+WIR+RTDN IRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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