BLASTX 7.6.2
Query= RU03425 /QuerySize=628
(627 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|168039809|ref|XP_001772389.1| predicted protein [Physcomitrel... 184 6e-045
gi|18396326|ref|NP_566182.1| zinc finger (C2H2 type) family prot... 179 2e-043
gi|116779907|gb|ABK21472.1| unknown [Picea sitchensis] 175 3e-042
gi|118485826|gb|ABK94760.1| unknown [Populus trichocarpa] 175 3e-042
gi|147788095|emb|CAN67065.1| hypothetical protein [Vitis vinifera] 171 4e-041
>gi|168039809|ref|XP_001772389.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 105
Score = 184 bits (465), Expect = 6e-045
Identities = 85/105 (80%), Positives = 94/105 (89%)
Frame = +2
Query: 95 MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGIADRTGQDKGGHAKYECPHCKITAPDVK 274
MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAG+ DR G DKGGHAK CP CK TAPD+K
Sbjct: 1 MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGVVDRKGLDKGGHAKLACPVCKATAPDMK 60
Query: 275 SMQIHHDSKHPKIPFDEEKIVNRHASTSQAPAEKPKPGVRGSLKK 409
SMQIHHD+KHPK+P++E+K++N HASTS A EKPKPGVRGSLKK
Sbjct: 61 SMQIHHDAKHPKLPWEEDKLINLHASTSVAAEEKPKPGVRGSLKK 105
>gi|18396326|ref|NP_566182.1| zinc finger (C2H2 type) family protein
[Arabidopsis thaliana]
Length = 105
Score = 179 bits (452), Expect = 2e-043
Identities = 82/105 (78%), Positives = 92/105 (87%)
Frame = +2
Query: 95 MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGIADRTGQDKGGHAKYECPHCKITAPDVK 274
MTGKAKPKKHTAKEIQAKIDAA TNRGGGKAGIADRTG++KGGHAKYECPHCKITAP +K
Sbjct: 1 MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK 60
Query: 275 SMQIHHDSKHPKIPFDEEKIVNRHASTSQAPAEKPKPGVRGSLKK 409
+MQIHH+SKHP I ++E K+VN HA + KPKPG+RGSLKK
Sbjct: 61 TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK 105
>gi|116779907|gb|ABK21472.1| unknown [Picea sitchensis]
Length = 104
Score = 175 bits (442), Expect = 3e-042
Identities = 78/104 (75%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Frame = +2
Query: 95 MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGIADRTGQDKGGHAKYECPHCKITAPDVK 274
MTGKAKPKKHTAKEI AK+DAATT+RGGGKAG+ DR G +KGGHAKYECPHCK TAPD+K
Sbjct: 1 MTGKAKPKKHTAKEIAAKVDAATTSRGGGKAGLHDRLGGEKGGHAKYECPHCKTTAPDIK 60
Query: 275 SMQIHHDSKHPKIPFDEEKIVNRHASTSQAPAEKPKPGVRGSLK 406
+M+IHH++KHPKIP++E KI+N+HA T QA KP+PG+RGSLK
Sbjct: 61 TMEIHHEAKHPKIPYEESKIINKHA-TVQADPNKPRPGIRGSLK 103
>gi|118485826|gb|ABK94760.1| unknown [Populus trichocarpa]
Length = 104
Score = 175 bits (442), Expect = 3e-042
Identities = 80/104 (76%), Positives = 93/104 (89%), Gaps = 1/104 (0%)
Frame = +2
Query: 95 MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGIADRTGQDKGGHAKYECPHCKITAPDVK 274
MTGKAKPKKHTAKEI AK+DAATTNRGGGKAG ADRTGQ+KGGHAKYECPHCKITAPD+K
Sbjct: 1 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK 60
Query: 275 SMQIHHDSKHPKIPFDEEKIVNRHASTSQAPAEKPKPGVRGSLK 406
+MQIHHD++HPK+PF+E+K+ N HA A + KP+PGV+GS K
Sbjct: 61 TMQIHHDARHPKLPFEEDKLSNLHA-VHVADSSKPRPGVKGSHK 103
>gi|147788095|emb|CAN67065.1| hypothetical protein [Vitis vinifera]
Length = 112
Score = 171 bits (432), Expect = 4e-041
Identities = 81/105 (77%), Positives = 91/105 (86%), Gaps = 1/105 (0%)
Frame = +2
Query: 95 MTGKAKPKKHTAKEIQAKIDAATTNRGGGKAGIADRTGQDKGGHAKYECPHCKITAPDVK 274
MTGKAKPKKHTAKEI AK+DAATTNRGGGKAG ADR+G DKGGHAK ECP CKITAPD+K
Sbjct: 1 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRSGLDKGGHAKLECPLCKITAPDLK 60
Query: 275 SMQIHHDSKHPKIPFDEEKIVNRHASTSQAPAEKPKPGVRGSLKK 409
SMQIHH+++HPK+PFDE K+ N HAS S + KP+PGVRGS KK
Sbjct: 61 SMQIHHEARHPKVPFDEAKLSNLHAS-SVPESSKPRPGVRGSFKK 104
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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