BLASTX 7.6.2
Query= RU03444 /QuerySize=835
(834 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|56562199|emb|CAI05895.1| putative auxin influx carrier protei... 89 4e-016
gi|57867899|gb|AAW57318.1| auxin influx protein [Populus tomentosa] 70 2e-010
gi|126217792|gb|ABN81349.1| auxin influx transport protein [Casu... 67 2e-009
gi|6650716|gb|AAF21982.1|AF115543_1 AUX1-like protein [Populus t... 66 3e-009
gi|5881784|emb|CAB55758.1| putative AUX1-like permease [Arabidop... 64 1e-008
>gi|56562199|emb|CAI05895.1| putative auxin influx carrier protein [Prunus
avium]
Length = 483
Score = 89 bits (219), Expect = 4e-016
Identities = 42/56 (75%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = -2
Query: 170 LPQKQAEEAIVSNFSEGADHEGKELGAEENKDGENASLFSVKNFLWHGGSAWDAWF 3
L QKQAEEAIVSNFSE DHEGKE ++K+ EN SLF+VKNFLWHGGS WDAWF
Sbjct: 2 LAQKQAEEAIVSNFSEAHDHEGKE-DHHQDKEEENTSLFNVKNFLWHGGSVWDAWF 56
>gi|57867899|gb|AAW57318.1| auxin influx protein [Populus tomentosa]
Length = 477
Score = 70 bits (169), Expect = 2e-010
Identities = 34/52 (65%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Frame = -2
Query: 158 QAEEAIVSNFSEGADHEGKELGAEENKDGENASLFSVKNFLWHGGSAWDAWF 3
QAEEAIV N+SE HEGKE EEN SLFS+K+ LWHGGS WDAWF
Sbjct: 6 QAEEAIVPNYSETDQHEGKEEETEENH-----SLFSIKSALWHGGSVWDAWF 52
>gi|126217792|gb|ABN81349.1| auxin influx transport protein [Casuarina glauca]
Length = 480
Score = 67 bits (162), Expect = 2e-009
Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 6/51 (11%)
Frame = -2
Query: 155 AEEAIVSNFSEGADHEGKELGAEENKDGENASLFSVKNFLWHGGSAWDAWF 3
AEEAIVSNFSE +HEGK + + E+ S+FSVK FLWHGGS WDAWF
Sbjct: 7 AEEAIVSNFSE-TEHEGK-----DQEQPEDHSIFSVKTFLWHGGSVWDAWF 51
>gi|6650716|gb|AAF21982.1|AF115543_1 AUX1-like protein [Populus tremula x
Populus tremuloides]
Length = 477
Score = 66 bits (160), Expect = 3e-009
Identities = 33/52 (63%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Frame = -2
Query: 158 QAEEAIVSNFSEGADHEGKELGAEENKDGENASLFSVKNFLWHGGSAWDAWF 3
QAEEAIV ++SE HEGKE EEN SLFS+K+ LWHGGS WDAWF
Sbjct: 6 QAEEAIVPSYSETDLHEGKEEETEENH-----SLFSIKSALWHGGSVWDAWF 52
>gi|5881784|emb|CAB55758.1| putative AUX1-like permease [Arabidopsis thaliana]
Length = 485
Score = 64 bits (154), Expect = 1e-008
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -2
Query: 173 MLPQKQAEEAI-VSNFSEGADHEGKELGAEENKDGENASLFSVKNFLWHGGSAWDAWF 3
M +KQAEE+I VS E A + ++ AEE+ DG + FS+K+FLWHGGSAWDAWF
Sbjct: 1 MSGEKQAEESIVVSGDEEVAGRKVEDSAAEEDIDGNGGNGFSMKSFLWHGGSAWDAWF 58
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
|