BLASTX 7.6.2
Query= RU03479 /QuerySize=360
(359 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157352214|emb|CAO43242.1| unnamed protein product [Vitis vini... 127 2e-028
gi|18398861|ref|NP_565442.1| integral membrane Yip1 family prote... 117 3e-025
gi|110740688|dbj|BAE98446.1| hypothetical protein [Arabidopsis t... 117 3e-025
gi|21553537|gb|AAM62630.1| unknown [Arabidopsis thaliana] 114 2e-024
gi|14253159|emb|CAC39318.1| VMP3 protein [Volvox carteri f. naga... 95 1e-018
>gi|157352214|emb|CAO43242.1| unnamed protein product [Vitis vinifera]
Length = 282
Score = 127 bits (318), Expect = 2e-028
Identities = 67/96 (69%), Positives = 78/96 (81%), Gaps = 8/96 (8%)
Frame = +1
Query: 46 SDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPVSSSSSPFIQSNLP 225
SDT+PLHPSSQSDIDEIENLINASVQSGP TVLPA+PPSPPRASIPV SS+PFIQSN+P
Sbjct: 4 SDTIPLHPSSQSDIDEIENLINASVQSGPATVLPARPPSPPRASIPV--SSTPFIQSNIP 61
Query: 226 QPAPPASSKPKPALPPSVPA--PPPVPSAAKQTNKR 327
PP +KP P +P VPA PPP+P+ + ++ R
Sbjct: 62 ---PPTYNKP-PVVPAVVPAAVPPPLPNTSNSSSTR 93
>gi|18398861|ref|NP_565442.1| integral membrane Yip1 family protein [Arabidopsis
thaliana]
Length = 281
Score = 117 bits (292), Expect = 3e-025
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
Frame = +1
Query: 43 ESDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPV--SSSSSPFIQS 216
+ DTVPLHPSSQSDIDEIENLIN SVQSGP TVL A+PPSP R SIPV SSSSSPF+QS
Sbjct: 3 QGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFMQS 62
Query: 217 NLPQPAPPASSKPKPALPPSVPAPPPVPSAAKQTN 321
NLP P P+SS K VP PPP+P+ + +N
Sbjct: 63 NLP-PLHPSSSAQKVT---HVPVPPPLPAVSNSSN 93
>gi|110740688|dbj|BAE98446.1| hypothetical protein [Arabidopsis thaliana]
Length = 240
Score = 117 bits (292), Expect = 3e-025
Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
Frame = +1
Query: 43 ESDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPV--SSSSSPFIQS 216
+ DTVPLHPSSQSDIDEIENLIN SVQSGP TVL A+PPSP R SIPV SSSSSPF+QS
Sbjct: 3 QGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFMQS 62
Query: 217 NLPQPAPPASSKPKPALPPSVPAPPPVPSAAKQTN 321
NLP P P+SS K VP PPP+P+ + +N
Sbjct: 63 NLP-PLHPSSSAQKVT---HVPVPPPLPAVSNSSN 93
>gi|21553537|gb|AAM62630.1| unknown [Arabidopsis thaliana]
Length = 281
Score = 114 bits (285), Expect = 2e-024
Identities = 61/95 (64%), Positives = 71/95 (74%), Gaps = 6/95 (6%)
Frame = +1
Query: 43 ESDTVPLHPSSQSDIDEIENLINASVQSGPTTVLPAKPPSPPRASIPV--SSSSSPFIQS 216
+ DTVPLHPSSQSDIDEIENLIN SVQSGP TVL A+PPSP R SIPV SSSSSPF+QS
Sbjct: 3 QGDTVPLHPSSQSDIDEIENLINESVQSGPGTVLAARPPSPTRPSIPVSSSSSSSPFMQS 62
Query: 217 NLPQPAPPASSKPKPALPPSVPAPPPVPSAAKQTN 321
NLP P +S++ VP PPP+P+ + +N
Sbjct: 63 NLPXLHPSSSAQK----VTHVPVPPPLPAVSNSSN 93
>gi|14253159|emb|CAC39318.1| VMP3 protein [Volvox carteri f. nagariensis]
Length = 687
Score = 95 bits (234), Expect = 1e-018
Identities = 52/106 (49%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Frame = +2
Query: 35 PTAKATPSPSTLPPSPTSTRSKT*STPASNPAPPPSSPPSLPAPHAPPSPSPP---PPPP 205
PT+ PSP+ PPSP S P +P PPPS PP P P +PP P+PP PPPP
Sbjct: 569 PTSPDPPSPN--PPSPDPPSPDPPSAPPPSP-PPPSPPPPNPPPPSPPPPNPPPPSPPPP 625
Query: 206 SSNPTSPNRPLPPPPSPSLLCRRLSPPLPPSPPPPNKQTNGPQTIR 343
S P SP P PPPPSP R P PPSPPPP P T R
Sbjct: 626 SPPPPSPPPPNPPPPSPPPPSPRPPTPPPPSPPPPRPPPRPPPTRR 671
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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