BLASTX 7.6.2
Query= RU03519 /QuerySize=1314
(1313 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|23495354|dbj|BAC20171.1| spermidine synthase [Malus x domestica] 587 7e-166
gi|23495352|dbj|BAC20170.1| spermidine synthase [Malus x domestica] 587 1e-165
gi|6094335|sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synth... 557 8e-157
gi|12230014|sp|Q9ZUB3.1|SPD1_ARATH Spermidine synthase 1 (SPDSY ... 550 2e-154
gi|126153731|emb|CAM35497.1| spermidine synthase [Lotus japonicus] 548 6e-154
>gi|23495354|dbj|BAC20171.1| spermidine synthase [Malus x domestica]
Length = 335
Score = 587 bits (1513), Expect = 7e-166
Identities = 290/335 (86%), Positives = 311/335 (92%), Gaps = 5/335 (1%)
Frame = +3
Query: 66 MAEDGVVGSADFSAKRPREEEENCVSSAAAA--METETAKDPDCVSGVIPGWFSEISPMW 239
MA++ VVGSAD KRPREEEEN +AA+A MET+ K+PD VS VIPGWFSEISPMW
Sbjct: 1 MADEIVVGSADLPLKRPREEEENGAEAAASAVSMETDGGKEPDSVSAVIPGWFSEISPMW 60
Query: 240 PGEAHSLKIEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPL 419
PGEAHSLKIEKILFQGKSDYQNVMVFQS+TYGKVLVLDGVIQLTERDECAYQEMITHLPL
Sbjct: 61 PGEAHSLKIEKILFQGKSDYQNVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPL 120
Query: 420 CSIPNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVSKQFFPRVAIGYEDPR 599
CSIPNPKKVLVIGGGDGGVLREVAR++SVE+IDICEIDKMVVDVSKQFFP VAIGY+DPR
Sbjct: 121 CSIPNPKKVLVIGGGDGGVLREVARYASVEKIDICEIDKMVVDVSKQFFPDVAIGYDDPR 180
Query: 600 VTLNVGDGVAFLRAVPAGTYDAIIVDSSDPIGPAQELFEKPFFQSVANALRPGGVVCTQA 779
V+L+VGDGVAFL+AVPAGTYDA+IVDSSDPIGPA+ELFEKPFFQ+VANALRPGGVVCTQA
Sbjct: 181 VSLHVGDGVAFLKAVPAGTYDAVIVDSSDPIGPAKELFEKPFFQTVANALRPGGVVCTQA 240
Query: 780 ESIWLHMHIIEDIVSNCHQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPVNP 959
ESIWLHM IIEDIV NC ++FKGSVNYAWTTVPTYPSGVIGFMLCSTEGP VDFKHPVN
Sbjct: 241 ESIWLHMDIIEDIVENCREVFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNS 300
Query: 960 IAENDGSKDPLKFYNSEIHTAAFCLPSFAKKVIES 1064
I D SK PLKFYNSEIHTAAFCLPSFAKKVI++
Sbjct: 301 I---DASKRPLKFYNSEIHTAAFCLPSFAKKVIDA 332
>gi|23495352|dbj|BAC20170.1| spermidine synthase [Malus x domestica]
Length = 335
Score = 587 bits (1511), Expect = 1e-165
Identities = 289/335 (86%), Positives = 311/335 (92%), Gaps = 5/335 (1%)
Frame = +3
Query: 66 MAEDGVVGSADFSAKRPREEEENCVSSAAAA--METETAKDPDCVSGVIPGWFSEISPMW 239
MA++ V GSADF KRPREEEEN ++AA+A ME + K+PD VS VIPGWFSEIS MW
Sbjct: 1 MADESVAGSADFPVKRPREEEENGSAAAASAVSMEPDGGKEPDSVSAVIPGWFSEISSMW 60
Query: 240 PGEAHSLKIEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPL 419
PGEAHSLKIEKILFQGKSDYQNVMVFQS+TYGKVLVLDGVIQLTERDECAYQEMITHLPL
Sbjct: 61 PGEAHSLKIEKILFQGKSDYQNVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPL 120
Query: 420 CSIPNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVSKQFFPRVAIGYEDPR 599
CSIPNPKKVLVIGGGDGGVLREVAR++SVE+IDICEIDKMV+DVSKQFFP VAIGYEDPR
Sbjct: 121 CSIPNPKKVLVIGGGDGGVLREVARYASVEKIDICEIDKMVIDVSKQFFPEVAIGYEDPR 180
Query: 600 VTLNVGDGVAFLRAVPAGTYDAIIVDSSDPIGPAQELFEKPFFQSVANALRPGGVVCTQA 779
VTL+VGDGVAFL+AVPAGTYDA+IVDSSDPIGPA+ELFEKPFFQ+VANALRPGGVVCTQA
Sbjct: 181 VTLHVGDGVAFLKAVPAGTYDAVIVDSSDPIGPAKELFEKPFFQTVANALRPGGVVCTQA 240
Query: 780 ESIWLHMHIIEDIVSNCHQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPVNP 959
ESIWLHMHIIEDIV+NC +IFKGSVNYAWTTVPTYPSGVIGFMLCSTEG VDFKHPVN
Sbjct: 241 ESIWLHMHIIEDIVANCREIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGTAVDFKHPVNS 300
Query: 960 IAENDGSKDPLKFYNSEIHTAAFCLPSFAKKVIES 1064
I D SK PL+FYNSEIHTAAFCLPSFAKKVI++
Sbjct: 301 I---DESKRPLRFYNSEIHTAAFCLPSFAKKVIDA 332
>gi|6094335|sp|O82147.1|SPDE_COFAR RecName: Full=Spermidine synthase;
Short=SPDSY; AltName: Full=Putrescine aminopropyltransferase
Length = 316
Score = 557 bits (1435), Expect = 8e-157
Identities = 271/304 (89%), Positives = 285/304 (93%), Gaps = 3/304 (0%)
Frame = +3
Query: 168 ETAKDPDCVSGVIPGWFSEISPMWPGEAHSLKIEKILFQGKSDYQNVMVFQSSTYGKVLV 347
E A+ PD VS VIPGWFSEISPMWPGEAHSLK+EKILFQGKSDYQNVMVFQSSTYGKVLV
Sbjct: 12 EAAQLPDGVSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLV 71
Query: 348 LDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEQIDICE 527
LDGVIQLTERDECAYQEMI HLPLCSIP+PKKVLVIGGGDGGVLREVARH SVEQIDICE
Sbjct: 72 LDGVIQLTERDECAYQEMIAHLPLCSIPSPKKVLVIGGGDGGVLREVARHLSVEQIDICE 131
Query: 528 IDKMVVDVSKQFFPRVAIGYEDPRVTLNVGDGVAFLRAVPAGTYDAIIVDSSDPIGPAQE 707
IDKMVVDVSKQFFP VA+G+EDPRV L++GDGVAFL+AVP GTYDAIIVDSSDPIGPAQE
Sbjct: 132 IDKMVVDVSKQFFPDVAVGFEDPRVVLHIGDGVAFLKAVPEGTYDAIIVDSSDPIGPAQE 191
Query: 708 LFEKPFFQSVANALRPGGVVCTQAESIWLHMHIIEDIVSNCHQIFKGSVNYAWTTVPTYP 887
LFEKPFF+SVA ALRPGGVVCTQAESIWLHMHIIEDIV+NC QIFKGSVNYAWTTVPTYP
Sbjct: 192 LFEKPFFESVAKALRPGGVVCTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP 251
Query: 888 SGVIGFMLCSTEGPPVDFKHPVNPIAENDG---SKDPLKFYNSEIHTAAFCLPSFAKKVI 1058
SGVIGFMLCSTEGPPVDFKHP+NPI NDG + PLKFYNSEIH+AAFCLPSFAKKVI
Sbjct: 252 SGVIGFMLCSTEGPPVDFKHPINPIDANDGRSKTMKPLKFYNSEIHSAAFCLPSFAKKVI 311
Query: 1059 ESMA 1070
+S A
Sbjct: 312 DSKA 315
>gi|12230014|sp|Q9ZUB3.1|SPD1_ARATH Spermidine synthase 1 (SPDSY 1) (Putrescine
aminopropyltransferase 1)
Length = 334
Score = 550 bits (1415), Expect = 2e-154
Identities = 269/325 (82%), Positives = 293/325 (90%), Gaps = 7/325 (2%)
Frame = +3
Query: 108 KRPREEEENCVSSAAAAMETETA---KDPDCVSGVIPGWFSEISPMWPGEAHSLKIEKIL 278
KRPREE++N AA METE K+P C S VIPGWFSE+SPMWPGEAHSLK+EK+L
Sbjct: 12 KRPREEDDN---GGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVL 68
Query: 279 FQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 458
FQGKSDYQ+V+VFQS+TYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG
Sbjct: 69 FQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIG 128
Query: 459 GGDGGVLREVARHSSVEQIDICEIDKMVVDVSKQFFPRVAIGYEDPRVTLNVGDGVAFLR 638
GGDGGVLREVARH+S+EQID+CEIDKMVVDVSKQFFP VAIGYEDPRV L +GDGVAFL+
Sbjct: 129 GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 188
Query: 639 AVPAGTYDAIIVDSSDPIGPAQELFEKPFFQSVANALRPGGVVCTQAESIWLHMHIIEDI 818
G+YDA+IVDSSDPIGPA+ELFEKPFFQSVA ALRPGGVVCTQAES+WLHM IIEDI
Sbjct: 189 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDI 248
Query: 819 VSNCHQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPVNPIAENDG-SKDPLK 995
VSNC +IFKGSVNYAWT+VPTYPSGVIGFMLCSTEGP VDFKHP+NPI E+ S PLK
Sbjct: 249 VSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEGPDVDFKHPLNPIDESSSKSNGPLK 308
Query: 996 FYNSEIHTAAFCLPSFAKKVIESMA 1070
FYN+EIH+AAFCLPSFAKKVIES A
Sbjct: 309 FYNAEIHSAAFCLPSFAKKVIESKA 333
>gi|126153731|emb|CAM35497.1| spermidine synthase [Lotus japonicus]
Length = 328
Score = 548 bits (1410), Expect = 6e-154
Identities = 267/327 (81%), Positives = 291/327 (88%), Gaps = 5/327 (1%)
Frame = +3
Query: 96 DFSAKRPREEEENCVSSAAAAMETETAKDPDCVSGVIPGWFSEISPMWPGEAHSLKIEKI 275
D KR REEEE + + ++ T P +S VIPGWFSEISPMWPGEAHSLK+EKI
Sbjct: 4 DLPVKRQREEEEEDQQNGLSQNDSST---PQGLSAVIPGWFSEISPMWPGEAHSLKVEKI 60
Query: 276 LFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVI 455
LFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVI
Sbjct: 61 LFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVI 120
Query: 456 GGGDGGVLREVARHSSVEQIDICEIDKMVVDVSKQFFPRVAIGYEDPRVTLNVGDGVAFL 635
GGGDGGVLREV+RHSSVE+IDICEIDKMVVDVSK+FFP +A+G+EDPRV+L++GDGVAFL
Sbjct: 121 GGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKEFFPDIAVGFEDPRVSLHIGDGVAFL 180
Query: 636 RAVPAGTYDAIIVDSSDPIGPAQELFEKPFFQSVANALRPGGVVCTQAESIWLHMHIIED 815
+A P G+YDA+IVDSSDPIGPAQELFEKPFF SVA ALRPGGVVCTQAESIWLHMHIIED
Sbjct: 181 KAAPEGSYDAVIVDSSDPIGPAQELFEKPFFSSVARALRPGGVVCTQAESIWLHMHIIED 240
Query: 816 IVSNCHQIFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPPVDFKHPVNPIAENDG--SKDP 989
IV+NC QIFKGSVNYAWTTVPTYPSG+IGFMLCSTEGP VDFKHPVNPI E+D S P
Sbjct: 241 IVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKHPVNPIDEDDSQQSARP 300
Query: 990 LKFYNSEIHTAAFCLPSFAKKVIESMA 1070
LKFYN EIH+AAFCLPSFAK+ I + A
Sbjct: 301 LKFYNREIHSAAFCLPSFAKRAIGAKA 327
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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