BLASTX 7.6.2
Query= RU03543 /QuerySize=960
(959 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|439493|dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida] 191 1e-046
gi|71979887|dbj|BAE17114.1| Cys2-His2 type zinc finger protein [... 190 3e-046
gi|147838864|emb|CAN61394.1| hypothetical protein [Vitis vinifera] 190 3e-046
gi|114431556|gb|ABI74621.1| C2H2 zinc finger protein 1 [Thellung... 153 2e-035
gi|157335633|emb|CAO61463.1| unnamed protein product [Vitis vini... 138 9e-031
>gi|439493|dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]
Length = 253
Score = 191 bits (483), Expect = 1e-046
Identities = 117/259 (45%), Positives = 148/259 (57%), Gaps = 42/259 (16%)
Frame = +1
Query: 64 MALQALNSPNTAALGGFEDEPNRNMNHHLASKRKRSKRPR-FEDSLSEEEYMAFCLLLLA 240
MAL+ALNSP T F+ E N +K KRSKR R E +EEEY+A CL++LA
Sbjct: 1 MALEALNSPTTTTPPSFQFENNGLKYLESWTKGKRSKRQRSMERQCTEEEYLALCLIMLA 60
Query: 241 RG-GTTNATDTTATATAPLPPHPPAS-------------YRCVVCSKAFGSYQALGGHKA 378
R G+ N ++ + PLPP P + Y+C VC K FGSYQALGGHKA
Sbjct: 61 RSDGSVN--NSRSLPPPPLPPSVPVTSQINATLLEQKNLYKCSVCGKGFGSYQALGGHKA 118
Query: 379 SHRKSDATSAVSAAVTATVKTEIPAVTAAS---GGRTHECTICHKCFPTGQALGGHKRCH 549
SHRK + + T+T T + ++A+ GRTHEC+ICHKCFPTGQALGGHKRCH
Sbjct: 119 SHRKLVSMGGDEQSTTSTT-TNVTGTSSANVNGNGRTHECSICHKCFPTGQALGGHKRCH 177
Query: 550 YDGGSSTANSAVT---TVSEGGGGSSSHGQSQSQRGFVLDLNLPAEPEVLQVWTGFDKKK 720
YDGG+ N +V+ T SEG G + SH + DLN+PA PE W GF
Sbjct: 178 YDGGNGNGNGSVSVGVTSSEGVGSTISHHRD-------FDLNIPALPE---FWPGF---- 223
Query: 721 STQVSAEQEEVQSPMPEKK 777
+ ++EV+SP P KK
Sbjct: 224 ----GSGEDEVESPHPAKK 238
>gi|71979887|dbj|BAE17114.1| Cys2-His2 type zinc finger protein [Nicotiana
tabacum]
Length = 253
Score = 190 bits (480), Expect = 3e-046
Identities = 117/253 (46%), Positives = 141/253 (55%), Gaps = 29/253 (11%)
Frame = +1
Query: 64 MALQALNSPNTAALGGFEDEPNRNMNH-HLASKRKRSKRPR-FEDSLSEEEYMAFCLLLL 237
MAL+ LNSP T F+ E N + + +K KRSKRPR E +EEEY+A CL++L
Sbjct: 1 MALETLNSPTTTTPPTFQFENNGQLRYLENWTKGKRSKRPRSMERQPTEEEYLALCLIML 60
Query: 238 ARG-GTTNATDTTATATAPL-----PPHPPASYRCVVCSKAFGSYQALGGHKASHRK--- 390
AR G+ N + AP+ PP Y+C VC K FGSYQALGGHKASHRK
Sbjct: 61 ARSDGSANQEQSLTPPPAPVMKIHAPPEEKMVYKCSVCGKGFGSYQALGGHKASHRKLVA 120
Query: 391 ----SDATSAVSAAVTATVKTEIPAVTAASGGRTHECTICHKCFPTGQALGGHKRCHYDG 558
D S S AT T G+THEC+ICHKCFPTGQALGGHKRCHYDG
Sbjct: 121 GGGGGDDQSTTSTTTNATGTTSSANGNGNGSGKTHECSICHKCFPTGQALGGHKRCHYDG 180
Query: 559 GSSTANSAVTTVSEGGGGSSSHGQSQSQRGFVLDLNLPAEPEVLQVWTGFDKKKSTQVSA 738
G+S A+ +V + S G S G + S R F DLN+PA PE W F
Sbjct: 181 GNSNASVSV-SASVGVTSSEGVGSTVSHRDF--DLNIPALPE---FWPRF--------GF 226
Query: 739 EQEEVQSPMPEKK 777
++EV+SP P KK
Sbjct: 227 GEDEVESPHPAKK 239
>gi|147838864|emb|CAN61394.1| hypothetical protein [Vitis vinifera]
Length = 233
Score = 190 bits (480), Expect = 3e-046
Identities = 102/191 (53%), Positives = 127/191 (66%), Gaps = 16/191 (8%)
Frame = +1
Query: 70 LQALNSPNTAALGGFEDEPNRNMNHHLAS--KRKRSKRPRFEDSLSEEEYMAFCLLLLAR 243
L+ALNSP T ++P+ H L S KRKRSKRPRF++ +EEEY+A CL++LAR
Sbjct: 3 LEALNSPTTPTPSFHYEQPSL---HSLESWAKRKRSKRPRFDNQPTEEEYLALCLIMLAR 59
Query: 244 GGTTNATDTTATATAPLP----PHPPASYRCVVCSKAFGSYQALGGHKASHRKSDATSAV 411
GG +T + +P P P +Y+C VC+KAF SYQALGGHKASHRK + +
Sbjct: 60 GGAAASTVSHRRHLSPPPALQVEAPKLTYKCSVCNKAFASYQALGGHKASHRKQSGSDDL 119
Query: 412 SAAVTATVKTEIPAVTAASGGRTHECTICHKCFPTGQALGGHKRCHYDGGSSTANSAVTT 591
SA++T T AASGGRTHEC+ICHK FPTGQALGGHKRCHY+GG+S S+ T
Sbjct: 120 SASITTT-----STAAAASGGRTHECSICHKTFPTGQALGGHKRCHYEGGASV--SSGVT 172
Query: 592 VSEGGGGSSSH 624
SEG G + SH
Sbjct: 173 SSEGVGSTHSH 183
>gi|114431556|gb|ABI74621.1| C2H2 zinc finger protein 1 [Thellungiella
halophila]
Length = 276
Score = 153 bits (386), Expect = 2e-035
Identities = 88/184 (47%), Positives = 109/184 (59%), Gaps = 12/184 (6%)
Frame = +1
Query: 160 RKRSKRPRFEDSLSEEEYMAFCLLLLARGGTTNATDTTATATAPLPPHPP-ASYRCVVCS 336
R R K +D L+EEEY+A CLL+LA ++ T +P P SY+C VC
Sbjct: 57 RSRPKSQNHQD-LTEEEYLALCLLMLANDQPSDHQPQTRFQPSPPPQESTRLSYKCSVCG 115
Query: 337 KAFGSYQALGGHKASHR-------KSDATSAVSAAVTATVKTEIPAVTAASGGRTHECTI 495
KAF SYQALGGHKASHR +D ++A S +V T AV A G+ HEC+I
Sbjct: 116 KAFPSYQALGGHKASHRIKPPTATTTDDSTAPSISVAGDKPTNSNAV--APSGKIHECSI 173
Query: 496 CHKCFPTGQALGGHKRCHYDGGSSTANSAVTTVSEGGGGSSSHGQSQSQRGFVLDLNLPA 675
CHK FPTGQALGGHKRCHY+G +VS G SS+ + +S RGF+ DLNLPA
Sbjct: 174 CHKVFPTGQALGGHKRCHYEGNLGGGGGGSKSVSHSGSVSSTVSEERSHRGFI-DLNLPA 232
Query: 676 EPEV 687
PE+
Sbjct: 233 LPEL 236
>gi|157335633|emb|CAO61463.1| unnamed protein product [Vitis vinifera]
Length = 219
Score = 138 bits (346), Expect = 9e-031
Identities = 68/115 (59%), Positives = 80/115 (69%), Gaps = 7/115 (6%)
Frame = +1
Query: 280 ATAPLPPHPPASYRCVVCSKAFGSYQALGGHKASHRKSDATSAVSAAVTATVKTEIPAVT 459
A A P +Y+C VC+KAF SYQALGGHKASHRK + +SA++T T
Sbjct: 62 AAASTVEAPKLTYKCSVCNKAFASYQALGGHKASHRKQSGSDDLSASITTT-----STAA 116
Query: 460 AASGGRTHECTICHKCFPTGQALGGHKRCHYDGGSSTANSAVTTVSEGGGGSSSH 624
AASGGRTHEC+ICHK FPTGQALGGHKRCHY+GG+S S+ T SEG G + SH
Sbjct: 117 AASGGRTHECSICHKTFPTGQALGGHKRCHYEGGASV--SSGVTSSEGVGSTHSH 169
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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