BLASTX 7.6.2
Query= RU03648 /QuerySize=1568
(1567 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1710807|sp|P08926.2|RUBA_PEA RecName: Full=RuBisCO large subu... 803 1e-230
gi|157346726|emb|CAO16795.1| unnamed protein product [Vitis vini... 798 3e-229
gi|84468456|dbj|BAE71311.1| putative rubisco subunit binding-pro... 795 4e-228
gi|84468296|dbj|BAE71231.1| putative rubisco subunit binding-pro... 792 2e-227
gi|84468288|dbj|BAE71227.1| putative rubisco subunit binding-pro... 792 2e-227
>gi|1710807|sp|P08926.2|RUBA_PEA RecName: Full=RuBisCO large subunit-binding
protein subunit alpha, chloroplastic; AltName: Full=60 kDa chaperonin
subunit alpha; AltName: Full=CPN-60 alpha; Flags: Precursor
Length = 587
Score = 803 bits (2072), Expect = 1e-230
Identities = 423/468 (90%), Positives = 448/468 (95%)
Frame = +2
Query: 2 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVDELENK 181
REVASKTNDSAGDGTTTASILAREIIKLGLL+VTSGANPVSIKKGIDKTV ALV+ELE
Sbjct: 120 REVASKTNDSAGDGTTTASILAREIIKLGLLNVTSGANPVSIKKGIDKTVAALVEELEKL 179
Query: 182 SRPVKGRDDVKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGME 361
+RPVKG DD+KAVA+ISAGNDE IG MIA+AIDKVGPDGVLSIESS+SFETTVEVEEGME
Sbjct: 180 ARPVKGGDDIKAVATISAGNDELIGKMIAEAIDKVGPDGVLSIESSNSFETTVEVEEGME 239
Query: 362 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDV 541
IDRGYISPQFVTNPEK IVEFENARVLITDQKISAIKDIIPLLEKTTQLR+PLLII+ED+
Sbjct: 240 IDRGYISPQFVTNPEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIISEDI 299
Query: 542 SGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLIENTTV 721
+GEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQA+DLGLL+ENTT+
Sbjct: 300 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTTI 359
Query: 722 EQLGLARKVTISKDSTTIIADQASKDELQSRIAQLKKELSETDSVYDTEKLAERIAKLSG 901
EQLGLARKVTISKDSTTIIAD ASKDELQSR+AQLKKELSETDS+YD+EKLAERIAKLSG
Sbjct: 360 EQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSIYDSEKLAERIAKLSG 419
Query: 902 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDRLE 1081
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS YVPAIK++LE
Sbjct: 420 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSGYVPAIKEKLE 479
Query: 1082 DADEKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYN.MTH.*ENLVDAG 1261
DADE+LGADIVQKALVAPAALIAQNAGIEGEVVVEK+K EWEVGYN MT ENLV++G
Sbjct: 480 DADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGEWEVGYNAMTDTYENLVESG 539
Query: 1262 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLTV 1405
VIDPAKVTRCALQNAASVAGMVLTTQAIVVEK KPK+ AAA QGLT+
Sbjct: 540 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAAAPQGLTI 587
>gi|157346726|emb|CAO16795.1| unnamed protein product [Vitis vinifera]
Length = 582
Score = 798 bits (2060), Expect = 3e-229
Identities = 418/468 (89%), Positives = 445/468 (95%)
Frame = +2
Query: 2 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVDELENK 181
REVASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVSIKKGIDKTV LV ELE K
Sbjct: 115 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKK 174
Query: 182 SRPVKGRDDVKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGME 361
+RPV+G DD+KAVASISAGNDE IG+MIADAI+KVGPDGVLSIESSSSFETTV+VEEGME
Sbjct: 175 ARPVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGME 234
Query: 362 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDV 541
IDRGYISPQFVTNPEKLI EFENARVL+TDQKI+ IKDIIPLLEKTTQLRSPLLI+AEDV
Sbjct: 235 IDRGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDV 294
Query: 542 SGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLIENTTV 721
+GEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAI+TG +FQANDLGLLIENT+V
Sbjct: 295 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGTDFQANDLGLLIENTSV 354
Query: 722 EQLGLARKVTISKDSTTIIADQASKDELQSRIAQLKKELSETDSVYDTEKLAERIAKLSG 901
EQLGLARKVTI+KDSTTIIAD ASKDE+Q+RIAQ+KKEL+ETDSVYDTEKLAERIAKLSG
Sbjct: 355 EQLGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSG 414
Query: 902 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDRLE 1081
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAA VHLSTYVPAIKD+LE
Sbjct: 415 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLE 474
Query: 1082 DADEKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYN.MTH.*ENLVDAG 1261
DADE+LGADIVQKALVAPA+LIA NAG+EGEVVVEK+K EW VGYN MT ENLV+AG
Sbjct: 475 DADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAG 534
Query: 1262 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLTV 1405
VIDPAKV RCALQNAASVAGMVLTTQAIVVEKAKPK+P AA QGLT+
Sbjct: 535 VIDPAKVARCALQNAASVAGMVLTTQAIVVEKAKPKAPVAAPPQGLTI 582
>gi|84468456|dbj|BAE71311.1| putative rubisco subunit binding-protein alpha
subunit [Trifolium pratense]
Length = 588
Score = 795 bits (2051), Expect = 4e-228
Identities = 418/468 (89%), Positives = 444/468 (94%)
Frame = +2
Query: 2 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVDELENK 181
REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTV L++ELE
Sbjct: 121 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVAGLIEELEKL 180
Query: 182 SRPVKGRDDVKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGME 361
+RPVKG DD+KAVASISAGNDE IG MIA+AIDKVGPDGVLSIESSSSFETTVEVEEGME
Sbjct: 181 ARPVKGGDDIKAVASISAGNDELIGKMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGME 240
Query: 362 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDV 541
IDRGYISPQFVTN EK IVEFENARVLITDQKISAIKDIIPLLEKTTQLR+PL IIAED+
Sbjct: 241 IDRGYISPQFVTNLEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLFIIAEDI 300
Query: 542 SGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLIENTTV 721
+GEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAE+QA+DLGLL+ENT++
Sbjct: 301 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEYQASDLGLLVENTSI 360
Query: 722 EQLGLARKVTISKDSTTIIADQASKDELQSRIAQLKKELSETDSVYDTEKLAERIAKLSG 901
EQLGLARKVTISKDSTTIIAD ASKDELQSR+AQLKKELSETDSVYD+EKLAERIAKLSG
Sbjct: 361 EQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSG 420
Query: 902 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDRLE 1081
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS YVPAIK++LE
Sbjct: 421 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLE 480
Query: 1082 DADEKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYN.MTH.*ENLVDAG 1261
DADE+LGADIVQKALVAPA+LIAQNAGIEGEVVVEK++ EWEVGYN MT ENL+++G
Sbjct: 481 DADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESG 540
Query: 1262 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLTV 1405
VIDPAKVTRCALQNAASVAGMVLTTQAIVVEK KP++P A QGLTV
Sbjct: 541 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 588
>gi|84468296|dbj|BAE71231.1| putative rubisco subunit binding-protein alpha
subunit [Trifolium pratense]
Length = 588
Score = 792 bits (2044), Expect = 2e-227
Identities = 417/468 (89%), Positives = 443/468 (94%)
Frame = +2
Query: 2 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVDELENK 181
REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTV L++ELE
Sbjct: 121 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVAGLIEELEKL 180
Query: 182 SRPVKGRDDVKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGME 361
+RPVKG DD+KAVASISAGNDE IG MIA+AI KVGPDGVLSIESSSSFETTVEVEEGME
Sbjct: 181 ARPVKGGDDIKAVASISAGNDELIGKMIAEAIGKVGPDGVLSIESSSSFETTVEVEEGME 240
Query: 362 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDV 541
IDRGYISPQFVTN EK IVEFENARVLITDQKISAIKDIIPLLEKTTQLR+PL IIAED+
Sbjct: 241 IDRGYISPQFVTNLEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLFIIAEDI 300
Query: 542 SGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLIENTTV 721
+GEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAE+QA+DLGLL+ENT++
Sbjct: 301 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEYQASDLGLLVENTSI 360
Query: 722 EQLGLARKVTISKDSTTIIADQASKDELQSRIAQLKKELSETDSVYDTEKLAERIAKLSG 901
EQLGLARKVTISKDSTTIIAD ASKDELQSR+AQLKKELSETDSVYD+EKLAERIAKLSG
Sbjct: 361 EQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSG 420
Query: 902 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDRLE 1081
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS YVPAIK++LE
Sbjct: 421 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLE 480
Query: 1082 DADEKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYN.MTH.*ENLVDAG 1261
DADE+LGADIVQKALVAPA+LIAQNAGIEGEVVVEK++ EWEVGYN MT ENL+++G
Sbjct: 481 DADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESG 540
Query: 1262 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLTV 1405
VIDPAKVTRCALQNAASVAGMVLTTQAIVVEK KP++P A QGLTV
Sbjct: 541 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 588
>gi|84468288|dbj|BAE71227.1| putative rubisco subunit binding-protein alpha
subunit [Trifolium pratense]
Length = 578
Score = 792 bits (2044), Expect = 2e-227
Identities = 417/468 (89%), Positives = 443/468 (94%)
Frame = +2
Query: 2 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVDELENK 181
REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTV L++ELE
Sbjct: 111 REVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVAGLIEELEKL 170
Query: 182 SRPVKGRDDVKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGME 361
+RPVKG DD+KAVASISAGNDE IG MIA+AI KVGPDGVLSIESSSSFETTVEVEEGME
Sbjct: 171 ARPVKGGDDIKAVASISAGNDELIGKMIAEAIGKVGPDGVLSIESSSSFETTVEVEEGME 230
Query: 362 IDRGYISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDV 541
IDRGYISPQFVTN EK IVEFENARVLITDQKISAIKDIIPLLEKTTQLR+PL IIAED+
Sbjct: 231 IDRGYISPQFVTNLEKSIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLFIIAEDI 290
Query: 542 SGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLIENTTV 721
+GEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAE+QA+DLGLL+ENT++
Sbjct: 291 TGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEYQASDLGLLVENTSI 350
Query: 722 EQLGLARKVTISKDSTTIIADQASKDELQSRIAQLKKELSETDSVYDTEKLAERIAKLSG 901
EQLGLARKVTISKDSTTIIAD ASKDELQSR+AQLKKELSETDSVYD+EKLAERIAKLSG
Sbjct: 351 EQLGLARKVTISKDSTTIIADAASKDELQSRVAQLKKELSETDSVYDSEKLAERIAKLSG 410
Query: 902 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPAIKDRLE 1081
GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG ALVHLS YVPAIK++LE
Sbjct: 411 GVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSAYVPAIKEKLE 470
Query: 1082 DADEKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYN.MTH.*ENLVDAG 1261
DADE+LGADIVQKALVAPA+LIAQNAGIEGEVVVEK++ EWEVGYN MT ENL+++G
Sbjct: 471 DADERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIRNGEWEVGYNAMTDTYENLIESG 530
Query: 1262 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLTV 1405
VIDPAKVTRCALQNAASVAGMVLTTQAIVVEK KP++P A QGLTV
Sbjct: 531 VIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPRAPVPGAPQGLTV 578
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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