BLASTX 7.6.2
Query= RU03656 /QuerySize=848
(847 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|24817256|emb|CAD56220.1| ribosomal protein RL5 [Cicer arietinum] 357 6e-097
gi|1173055|sp|P46287.1|RL11_MEDSA RecName: Full=60S ribosomal pr... 356 2e-096
gi|192910756|gb|ACF06486.1| 60S ribosomal protein L11 [Elaeis gu... 348 4e-094
gi|79595462|ref|NP_850376.2| RPL16A (ribosomal protein large sub... 347 6e-094
gi|118483608|gb|ABK93699.1| unknown [Populus trichocarpa] 347 6e-094
>gi|24817256|emb|CAD56220.1| ribosomal protein RL5 [Cicer arietinum]
Length = 181
Score = 357 bits (916), Expect = 6e-097
Identities = 178/181 (98%), Positives = 180/181 (99%)
Frame = +1
Query: 91 MASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 270
MASEKKL+NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 271 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 450
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 451 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 630
STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180
Query: 631 V 633
V
Sbjct: 181 V 181
>gi|1173055|sp|P46287.1|RL11_MEDSA RecName: Full=60S ribosomal protein L11;
AltName: Full=L5
Length = 181
Score = 356 bits (912), Expect = 2e-096
Identities = 177/181 (97%), Positives = 180/181 (99%)
Frame = +1
Query: 91 MASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 270
MASEKKL+NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 271 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 450
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 451 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 630
STGIYGMDF+VVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180
Query: 631 V 633
V
Sbjct: 181 V 181
>gi|192910756|gb|ACF06486.1| 60S ribosomal protein L11 [Elaeis guineensis]
Length = 182
Score = 348 bits (892), Expect = 4e-094
Identities = 171/179 (95%), Positives = 178/179 (99%)
Frame = +1
Query: 91 MASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 270
MASEKK++NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKMSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 271 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 450
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 451 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQA 627
STGIYGMDFYVVLERPGYRVGRRRRCK+RVGIQHRVTK+DAMKWFQVKYEGVILNK+QA
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQA 179
>gi|79595462|ref|NP_850376.2| RPL16A (ribosomal protein large subunit 16A);
structural constituent of ribosome [Arabidopsis thaliana]
Length = 182
Score = 347 bits (890), Expect = 6e-094
Identities = 172/180 (95%), Positives = 177/180 (98%)
Frame = +1
Query: 91 MASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 270
MASEKKL+NPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 271 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 450
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 451 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 630
STGIYGMDFYVVLERPGYRV RRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
>gi|118483608|gb|ABK93699.1| unknown [Populus trichocarpa]
Length = 180
Score = 347 bits (890), Expect = 6e-094
Identities = 173/180 (96%), Positives = 176/180 (97%)
Frame = +1
Query: 91 MASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 270
MASEKKL+NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 271 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDP 450
IRRNEKIACYVTVRGDKAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
Query: 451 STGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 630
STGIYGMDFYVVLERPGYRVGRRRRCK+RVGI RVTKDDAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSRVGIHQRVTKDDAMKWFQVKYEGVILNKSQNI 180
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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