BLASTX 7.6.2
Query= RU03701 /QuerySize=1595
(1594 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|147859325|emb|CAN83958.1| hypothetical protein [Vitis vinifera] 582 3e-164
gi|157337924|emb|CAO38968.1| unnamed protein product [Vitis vini... 559 4e-157
gi|108709398|gb|ABF97193.1| RNA recognition motif family protein... 486 4e-135
gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding prote... 484 1e-134
gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa (jap... 484 1e-134
>gi|147859325|emb|CAN83958.1| hypothetical protein [Vitis vinifera]
Length = 410
Score = 582 bits (1500), Expect = 3e-164
Identities = 289/413 (69%), Positives = 321/413 (77%), Gaps = 27/413 (6%)
Frame = -3
Query: 1496 MQQPSGGVV-------PADQQPQQQYQQQPP-QQWMMMPPQQQHQAAAAAQAGWAQQQAA 1341
M QP+ GVV P DQQ QYQQ PP QQWMMMPP QQ Q Q A
Sbjct: 1 MMQPAPGVVPPSMQPAPMDQQQPPQYQQPPPQQQWMMMPPPQQQQQ--------TQPPPA 52
Query: 1340 MQQQQQPQQYTAAAASQGSDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQT 1161
QQ QQY AA + +EIRSLWIGDL PWM+ENY CF TGE V+ KVIRNKQT
Sbjct: 53 WAQQAPQQQYVAAPQASNPEEIRSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQT 112
Query: 1160 GLPEGYGFIEFRTRSAAEQVLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFV 981
G EGYGFIE TR+AAE++LQ YNGT+MP++EQNFRLNWATLGAGERR DD PDYT+FV
Sbjct: 113 GQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFV 172
Query: 980 GDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNG 801
GDLA+DVTDY LQETFR HY SVKGAKVVTDRTTGRSKGYGFVRFGDE EQLRAMNEMNG
Sbjct: 173 GDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNG 232
Query: 800 QFCSSRPMRIGPAATKKPVGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEM 621
FCS+RPMRIGPAATKKPVG A++ ++QG GE+DPNNTTIFVGGLD +V D+
Sbjct: 233 MFCSTRPMRIGPAATKKPVG-------ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDDY 285
Query: 620 LRQSFGMFGELVHVKIPVGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSS 441
LRQ F +GELVHVKIPVGKRCGFVQFANRACAEQAL+ +NG +G+QS+RLSWGRSPS+
Sbjct: 286 LRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSN 345
Query: 440 KQNQPEQTQWNGAGGAGFYQYPQGYDAYTYAPPTQDPNLYYGGYAGYGNYQQP 282
KQ QP+Q QWNG G+Y Y QGY+AY YAPP QDPN+YYG Y GYGNYQQP
Sbjct: 346 KQAQPDQAQWNG----GYYGYAQGYEAYGYAPPPQDPNMYYGAYPGYGNYQQP 394
>gi|157337924|emb|CAO38968.1| unnamed protein product [Vitis vinifera]
Length = 364
Score = 559 bits (1438), Expect = 4e-157
Identities = 266/353 (75%), Positives = 298/353 (84%), Gaps = 5/353 (1%)
Frame = -3
Query: 1340 MQQQQQPQQYTAAAASQGSDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQT 1161
M Q QQY AA + +EIRSLWIGDL PWM+ENY+ CF TGE V+ KVIRNKQT
Sbjct: 1 MAPPPQQQQYVAAPQASNPEEIRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQT 60
Query: 1160 GLPEGYGFIEFRTRSAAEQVLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFV 981
G EGYGFIE TR+AAE++LQ YNGT+MP++EQNFRLNWATLGAGERR DD PDYT+FV
Sbjct: 61 GQCEGYGFIELATRAAAERILQTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFV 120
Query: 980 GDLAADVTDYTLQETFRAHYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNG 801
GDLA+DVTDY LQETFR HY SVKGAKVVTDRTTGRSKGYGFVRFGDE EQLRAMNEMNG
Sbjct: 121 GDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNG 180
Query: 800 QFCSSRPMRIGPAATKKPVGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEM 621
FCS+RPMRIGPAATKKPV GGQ FQKA++ ++QGN GE+DPNNTTIFVGGLD +V D+
Sbjct: 181 MFCSTRPMRIGPAATKKPV-GGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDDY 239
Query: 620 LRQSFGMFGELVHVKIPVGKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSS 441
LRQ F +GELVHVKIPVGKRCGFVQFANRACAEQAL+ +NG +G+QS+RLSWGRSPS+
Sbjct: 240 LRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPSN 299
Query: 440 KQNQPEQTQWNGAGGAGFYQYPQGYDAYTYAPPTQDPNLYYGGYAGYGNYQQP 282
KQ QP+Q QWNG G+Y Y QGY+AY YAPP QDPN+YYG Y GYGNYQQP
Sbjct: 300 KQAQPDQAQWNG----GYYGYAQGYEAYGYAPPPQDPNMYYGAYPGYGNYQQP 348
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed
[Oryza sativa (japonica cultivar-group)]
Length = 406
Score = 486 bits (1249), Expect = 4e-135
Identities = 243/405 (60%), Positives = 288/405 (71%), Gaps = 16/405 (3%)
Frame = -3
Query: 1454 PQQQYQQQPPQQWMMM----PPQQQHQAAAAAQAGWAQQQAAMQQQQQPQQYTAAAASQG 1287
PQ PP Q+ PP Q Q A A W Q Q A A
Sbjct: 8 PQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQ-----PPPPQAAPPPAPAGGAA 62
Query: 1286 SDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
DE+R+LWIGDL WM+ENY+ NCF GE ++AK+IRNKQTG PEGYGFIEF + + AE
Sbjct: 63 GDEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAE 122
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFRA 927
QVLQ YNG +MP+ Q F+LNWAT GAGE+R DDG DYT+FVGDLA+DVTD LQ+TF+A
Sbjct: 123 QVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKA 182
Query: 926 HYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKP 747
HY SVKGAKVV DR+TGRSKGYGFV+FGD EQ RAM EMNGQ+CSSRPMRIGPA+ KK
Sbjct: 183 HYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Query: 746 VGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIPV 567
+GG Q A Y ++QG ++DPNNTT+FVGGLDPSV DE+L+Q+F +GELV+VKIPV
Sbjct: 243 IGGQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPV 301
Query: 566 GKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWNGAGGAGF 387
GKRCGFVQ++NRA AE+A+ ++NG +G QS+RLSWGRSP +KQ Q +Q QWN AG+
Sbjct: 302 GKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN----AGY 357
Query: 386 YQY-PQGYDAYTYAPPTQDPNLY-YGGYAGYGNYQQPGAAYQQQQ 258
Y Y PQGYD Y Y P QDP +Y Y Y GYGNYQQP QQ
Sbjct: 358 YGYPPQGYDPYGYVRPPQDPAMYAYAAYPGYGNYQQPAPQQPPQQ 402
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza
sativa]
Length = 402
Score = 484 bits (1244), Expect = 1e-134
Identities = 241/397 (60%), Positives = 286/397 (72%), Gaps = 16/397 (4%)
Frame = -3
Query: 1454 PQQQYQQQPPQQWMMM----PPQQQHQAAAAAQAGWAQQQAAMQQQQQPQQYTAAAASQG 1287
PQ PP Q+ PP Q Q A A W Q Q A A
Sbjct: 8 PQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQ-----PPPPQAAPPPAPAGGAA 62
Query: 1286 SDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
DE+R+LWIGDL WM+ENY+ NCF GE ++AK+IRNKQTG PEGYGFIEF + + AE
Sbjct: 63 GDEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAE 122
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFRA 927
QVLQ YNG +MP+ Q F+LNWAT GAGE+R DDG DYT+FVGDLA+DVTD LQ+TF+A
Sbjct: 123 QVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKA 182
Query: 926 HYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKP 747
HY SVKGAKVV DR+TGRSKGYGFV+FGD EQ RAM EMNGQ+CSSRPMRIGPA+ KK
Sbjct: 183 HYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 242
Query: 746 VGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIPV 567
+GG Q A Y ++QG ++DPNNTT+FVGGLDPSV DE+L+Q+F +GELV+VKIPV
Sbjct: 243 IGGQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPV 301
Query: 566 GKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWNGAGGAGF 387
GKRCGFVQ++NRA AE+A+ ++NG +G QS+RLSWGRSP +KQ Q +Q QWN AG+
Sbjct: 302 GKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN----AGY 357
Query: 386 YQY-PQGYDAYTYAPPTQDPNLY-YGGYAGYGNYQQP 282
Y Y PQGYD Y Y P QDP +Y Y Y GYGNYQQP
Sbjct: 358 YGYPPQGYDPYGYVRPPQDPAMYAYAAYPGYGNYQQP 394
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa (japonica
cultivar-group)]
Length = 446
Score = 484 bits (1244), Expect = 1e-134
Identities = 241/397 (60%), Positives = 286/397 (72%), Gaps = 16/397 (4%)
Frame = -3
Query: 1454 PQQQYQQQPPQQWMMM----PPQQQHQAAAAAQAGWAQQQAAMQQQQQPQQYTAAAASQG 1287
PQ PP Q+ PP Q Q A A W Q Q A A
Sbjct: 52 PQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPPAAMWGQ-----PPPPQAAPPPAPAGGAA 106
Query: 1286 SDEIRSLWIGDLLPWMDENYILNCFGPTGEAVNAKVIRNKQTGLPEGYGFIEFRTRSAAE 1107
DE+R+LWIGDL WM+ENY+ NCF GE ++AK+IRNKQTG PEGYGFIEF + + AE
Sbjct: 107 GDEVRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAE 166
Query: 1106 QVLQNYNGTVMPSTEQNFRLNWATLGAGERRQDDGPDYTVFVGDLAADVTDYTLQETFRA 927
QVLQ YNG +MP+ Q F+LNWAT GAGE+R DDG DYT+FVGDLA+DVTD LQ+TF+A
Sbjct: 167 QVLQGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKA 226
Query: 926 HYHSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRAMNEMNGQFCSSRPMRIGPAATKKP 747
HY SVKGAKVV DR+TGRSKGYGFV+FGD EQ RAM EMNGQ+CSSRPMRIGPA+ KK
Sbjct: 227 HYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKN 286
Query: 746 VGGGQPFQKAAYPSSQGNPGEADPNNTTIFVGGLDPSVDDEMLRQSFGMFGELVHVKIPV 567
+GG Q A Y ++QG ++DPNNTT+FVGGLDPSV DE+L+Q+F +GELV+VKIPV
Sbjct: 287 IGGQQQ-PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPV 345
Query: 566 GKRCGFVQFANRACAEQALSVMNGRVVGSQSVRLSWGRSPSSKQNQPEQTQWNGAGGAGF 387
GKRCGFVQ++NRA AE+A+ ++NG +G QS+RLSWGRSP +KQ Q +Q QWN AG+
Sbjct: 346 GKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPGNKQPQQDQNQWN----AGY 401
Query: 386 YQY-PQGYDAYTYAPPTQDPNLY-YGGYAGYGNYQQP 282
Y Y PQGYD Y Y P QDP +Y Y Y GYGNYQQP
Sbjct: 402 YGYPPQGYDPYGYVRPPQDPAMYAYAAYPGYGNYQQP 438
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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