BLASTX 7.6.2
Query= RU03718 /QuerySize=1253
(1252 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|36957216|gb|AAQ87022.1| VDAC2.1 [Lotus corniculatus var. japo... 236 4e-060
gi|147772866|emb|CAN75907.1| hypothetical protein [Vitis vinifera] 234 1e-059
gi|60279272|emb|CAA63968.1| pom30 [Solanum tuberosum] 229 4e-058
gi|77999247|gb|ABB16970.1| POM30-like protein [Solanum tuberosum] 223 2e-056
gi|15240765|ref|NP_201551.1| porin, putative [Arabidopsis thaliana] 216 5e-054
>gi|36957216|gb|AAQ87022.1| VDAC2.1 [Lotus corniculatus var. japonicus]
Length = 276
Score = 236 bits (601), Expect = 4e-060
Identities = 151/304 (49%), Positives = 185/304 (60%), Gaps = 58/304 (19%)
Frame = +3
Query: 54 RGPGLFSDIGQKGQ------RSSDQGLQLRSEIQCLLLQRCRCGSHINSSR-KKEDCPTG 212
+GPGLFSDIG+K + SSDQ L + S G + S+ KK G
Sbjct: 3 KGPGLFSDIGKKPRDLLTKDYSSDQKLTVSS--------YSTAGVALTSTAVKKGGLSVG 54
Query: 213 DIATQYKYKNAVVDVKVDTESNISTTFTITDYCSIHKDYCFIQSARL*RWQVG------- 371
D+A YKYKN ++DVK+DT S ISTT T TD K I S +L + G
Sbjct: 55 DVAALYKYKNTLIDVKLDTASIISTTLTFTDLLPSTK---AIASFKLPDYNSGKLEVQYF 111
Query: 372 --GSVLS*PCNLNYSCCFESIPSH*FFSYHWYPQPLHLVQKLVMTPLLV----------- 512
+ L+ LN S P+ V TP++
Sbjct: 112 HDHATLTAAAALNQS-------------------PIIDVSATFGTPVIAVGAEAGYDTSS 152
Query: 513 -NFTKYTAGISVTQSVSNASIILGDKGDSIKASYVHYVDLLKRSAAVGEITRKFSTNENT 689
FTKYTAGISVT+ ++ASIILGDKGDSIKASY+H++D LK+SAAV EITRKFSTNENT
Sbjct: 153 GGFTKYTAGISVTKPDASASIILGDKGDSIKASYLHHLDQLKKSAAVAEITRKFSTNENT 212
Query: 690 FTVGGQYAIDPLTVVKAKLNNHGKLGALLQHEVIPKSLLTVSGEIDTKSLDKHPKFGLAI 869
FTVGG +AID LT V+A+LNNHGKLGALLQHE+IPKS+LT+S E+DTK+LDK+P+FGLAI
Sbjct: 213 FTVGGSFAIDHLTQVRARLNNHGKLGALLQHEIIPKSVLTISSEVDTKALDKNPRFGLAI 272
Query: 870 ALKP 881
ALKP
Sbjct: 273 ALKP 276
>gi|147772866|emb|CAN75907.1| hypothetical protein [Vitis vinifera]
Length = 276
Score = 234 bits (596), Expect = 1e-059
Identities = 140/277 (50%), Positives = 175/277 (63%), Gaps = 4/277 (1%)
Frame = +3
Query: 54 RGPGLFSDIGQKGQRSSDQGLQLRSEIQCLLLQRCRCGSHINSSR-KKEDCPTGDIATQY 230
+GPGLF+DIG+K + + S+ + + G I S+ KK TGD+A QY
Sbjct: 3 KGPGLFADIGKKAKDLLTR--DYISDQKFTVSTYSDTGVAITSTAVKKGGLSTGDVAVQY 60
Query: 231 KYKNAVVDVKVDTESNISTTFTITDYCSIHKDYCFIQSARL*RWQVGGSVLS*PCNLNYS 410
KYKN+V+DVK DT SNI+TT T T+ K + ++ L S
Sbjct: 61 KYKNSVIDVKADTGSNINTTLTFTEIIPSTKTIASFKFPDYNSGKLEVQYFHDHATLTTS 120
Query: 411 CCFESIPSH*FFSYHWYPQPLHLVQKLVMTPLLVNFTKYTAGISVTQSVSNASIILGDKG 590
P+ P + + FTKYTAGISV + S ASIILGDKG
Sbjct: 121 VALNQSPAVDLSVTIGTPS-IAFGAEAGYDTTSGCFTKYTAGISVAKPDSCASIILGDKG 179
Query: 591 DSIKASYVHYVDLLKRSAAVGEITRKFSTNENTFTVGGQYAIDPLTVVKAKLNNHGKLGA 770
D+I+ASYVH++D LK+SAAVGEI+R+FSTN+NTFTVGG YAIDPLT VKAKLNNHG LGA
Sbjct: 180 DTIRASYVHHLDSLKKSAAVGEISRRFSTNDNTFTVGGSYAIDPLTNVKAKLNNHGNLGA 239
Query: 771 LLQHEVIPKSLLTVSGEIDTKSLDKHPKFGLAIALKP 881
LLQHE+IPKS+LT+SGE DTK+LDK P+FGLA+ALKP
Sbjct: 240 LLQHEIIPKSILTLSGEFDTKALDKTPRFGLALALKP 276
>gi|60279272|emb|CAA63968.1| pom30 [Solanum tuberosum]
Length = 276
Score = 229 bits (583), Expect = 4e-058
Identities = 141/295 (47%), Positives = 179/295 (60%), Gaps = 40/295 (13%)
Frame = +3
Query: 54 RGPGLFSDIGQKGQ------RSSDQGLQLRSEIQCLLLQRCRCGSHINSSR-KKEDCPTG 212
+GPGLF+DIG+K + SDQ L + + G + S+ KK TG
Sbjct: 3 KGPGLFADIGKKARDLLTKDYISDQKLSISTYSD--------TGVALTSTAVKKGGLSTG 54
Query: 213 DIATQYKYKNAVVDVKVDTESNISTTFTITDYCSIHKDYCFIQSARL*RWQVGGSVLS*P 392
D+ QYKYKN ++DVKVDT SNISTT T+ D K I S + + G +
Sbjct: 55 DVGAQYKYKNTLIDVKVDTASNISTTLTLNDIAPSTKT---IASLKFPDYSSGKLEVQ-- 109
Query: 393 CNLNYSCCFESIPSH*FFSYHWYPQPLHLVQKLVMTPLLV------------NFTKYTAG 536
++ F + + P+ + + TP KYTAG
Sbjct: 110 -YYHHHAAFST-------AVGLKQSPIVDLSVTLGTPTFAIGAEASYETAEGKLAKYTAG 161
Query: 537 ISVTQSVSNASIILGDKGDSIKASYVHYVDLLKRSAAVGEITRKFSTNENTFTVGGQYAI 716
ISVT+ S A+IILGDKGD+IKASY+H++D LK+SAAVGEITR+FSTNENTFTVGG YA+
Sbjct: 162 ISVTKPDSCAAIILGDKGDTIKASYIHHLDELKKSAAVGEITRRFSTNENTFTVGGSYAV 221
Query: 717 DPLTVVKAKLNNHGKLGALLQHEVIPKSLLTVSGEIDTKSLDKHPKFGLAIALKP 881
D LT+VK KLNNHG LGALLQHE+IPKSLLT+S E DTK+L+K PKFG+A+ALKP
Sbjct: 222 DNLTIVKLKLNNHGNLGALLQHELIPKSLLTISSEFDTKALEKTPKFGVALALKP 276
>gi|77999247|gb|ABB16970.1| POM30-like protein [Solanum tuberosum]
Length = 275
Score = 223 bits (568), Expect = 2e-056
Identities = 139/292 (47%), Positives = 176/292 (60%), Gaps = 40/292 (13%)
Frame = +3
Query: 63 GLFSDIGQKGQ------RSSDQGLQLRSEIQCLLLQRCRCGSHINSSR-KKEDCPTGDIA 221
GLF+DIG+K + SDQ L + + G + S+ KK TGD+
Sbjct: 5 GLFADIGKKARDLLTKDYISDQKLSISTYSD--------TGVALTSTAVKKGGLSTGDVG 56
Query: 222 TQYKYKNAVVDVKVDTESNISTTFTITDYCSIHKDYCFIQSARL*RWQVGGSVLS*PCNL 401
QYKYKN ++DVKVDT SNISTT T+ D K I S + + G +
Sbjct: 57 AQYKYKNTLIDVKVDTASNISTTLTLNDIAPSTKT---IASLKFPDYSSGKLEVQ---YY 110
Query: 402 NYSCCFESIPSH*FFSYHWYPQPLHLVQKLVMTPLLV------------NFTKYTAGISV 545
++ F + + P+ + + TP KYTAGISV
Sbjct: 111 HHHAAFST-------AVGLKQSPIVDLSVTLGTPTFAIGAEASYETAEGKLAKYTAGISV 163
Query: 546 TQSVSNASIILGDKGDSIKASYVHYVDLLKRSAAVGEITRKFSTNENTFTVGGQYAIDPL 725
T+ S A+IILGDKGD+IKASY+H++D LK+SAAVGEITR+FSTNENTFTVGG YA+D L
Sbjct: 164 TKPDSCAAIILGDKGDTIKASYIHHLDELKKSAAVGEITRRFSTNENTFTVGGSYAVDNL 223
Query: 726 TVVKAKLNNHGKLGALLQHEVIPKSLLTVSGEIDTKSLDKHPKFGLAIALKP 881
T+VK KLNNHG LGALLQHE+IPKSLLT+S E DTK+L+K PKFG+A+ALKP
Sbjct: 224 TIVKLKLNNHGNLGALLQHELIPKSLLTISSEFDTKALEKTPKFGVALALKP 275
>gi|15240765|ref|NP_201551.1| porin, putative [Arabidopsis thaliana]
Length = 276
Score = 216 bits (548), Expect = 5e-054
Identities = 128/277 (46%), Positives = 170/277 (61%), Gaps = 4/277 (1%)
Frame = +3
Query: 54 RGPGLFSDIGQKGQRSSDQGLQLRSEIQCLLLQRCRCGSHINSSR-KKEDCPTGDIATQY 230
+GPGLF+DIG+K + + S+ + + G + S+ KK D+ATQY
Sbjct: 3 KGPGLFTDIGKKAKDLLTR--DYNSDQKFSISTYSASGVALTSTALKKGGVHAADVATQY 60
Query: 231 KYKNAVVDVKVDTESNISTTFTITDYCSIHKDYCFIQSARL*RWQVGGSVLS*PCNLNYS 410
KYKNA+ DVK+DT+S++ TT T+T+ K + ++ + +
Sbjct: 61 KYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVPDYNSAKLEVQYFHDHATVTAA 120
Query: 411 CCFESIPSH*FFSYHWYPQPLHLVQKLVMTPLLVNFTKYTAGISVTQSVSNASIILGDKG 590
+ P + P + + FTKY AGISVT+ + SIILGDKG
Sbjct: 121 AALKQNPLIDITATLGSP-VISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKG 179
Query: 591 DSIKASYVHYVDLLKRSAAVGEITRKFSTNENTFTVGGQYAIDPLTVVKAKLNNHGKLGA 770
DS+KASY+H+ D KR+AAVGE+ RKFSTNENT TVGG YAID T VKAKLNNHG LGA
Sbjct: 180 DSLKASYLHHFDEFKRTAAVGEVYRKFSTNENTITVGGLYAIDHSTAVKAKLNNHGTLGA 239
Query: 771 LLQHEVIPKSLLTVSGEIDTKSLDKHPKFGLAIALKP 881
LLQHEV+P+SL+TVS EIDTK+L+KHP+FGL++ALKP
Sbjct: 240 LLQHEVLPRSLVTVSSEIDTKALEKHPRFGLSLALKP 276
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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