BLASTX 7.6.2
Query= RU04020 /QuerySize=294
(293 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|6094048|sp|O49884|RL30_LUPLU 60S ribosomal protein L30 162 7e-039
gi|156530455|gb|ABU75308.1| ribosomal protein L30e [Pisum sativum] 162 7e-039
gi|118483895|gb|ABK93838.1| unknown [Populus trichocarpa] 162 7e-039
gi|118484057|gb|ABK93914.1| unknown [Populus trichocarpa] 160 3e-038
gi|157345068|emb|CAO71796.1| unnamed protein product [Vitis vini... 160 4e-038
>gi|6094048|sp|O49884|RL30_LUPLU 60S ribosomal protein L30
Length = 112
Score = 162 bits (409), Expect = 7e-039
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +3
Query: 45 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ SLRSSKGKLIII+NNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHHYNGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83
>gi|156530455|gb|ABU75308.1| ribosomal protein L30e [Pisum sativum]
Length = 112
Score = 162 bits (409), Expect = 7e-039
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +3
Query: 45 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ SLRSSKGKLIII+NNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHHYNGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83
>gi|118483895|gb|ABK93838.1| unknown [Populus trichocarpa]
Length = 112
Score = 162 bits (409), Expect = 7e-039
Identities = 79/83 (95%), Positives = 81/83 (97%)
Frame = +3
Query: 45 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ SLR+SKGKLIIISNNCPPLRKSEI
Sbjct: 1 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIISNNCPPLRKSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHHYNGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83
>gi|118484057|gb|ABK93914.1| unknown [Populus trichocarpa]
Length = 112
Score = 160 bits (404), Expect = 3e-038
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +3
Query: 45 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MV KKTKKTHESINNRLALVMKSGKYTLGYKTV+ SLRSSKGKLI++SNNCPPLRKSEI
Sbjct: 1 MVTAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILLSNNCPPLRKSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHHYNGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGT 83
>gi|157345068|emb|CAO71796.1| unnamed protein product [Vitis vinifera]
Length = 112
Score = 160 bits (403), Expect = 4e-038
Identities = 78/83 (93%), Positives = 81/83 (97%)
Frame = +3
Query: 45 MVAVKKTKKTHESINNRLALVMKSGKYTLGYKTVIDSLRSSKGKLIIISNNCPPLRKSEI 224
MVA KKTKKTHESINNRLALVMKSGKYTLGYKTV+ SLRSSKGKLI+ISNNCPPLRKSEI
Sbjct: 1 MVAGKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLILISNNCPPLRKSEI 60
Query: 225 EYYAMLAKVGVHHYNGNNVDLGT 293
EYYAMLAKVGVHH+NGNNVDLGT
Sbjct: 61 EYYAMLAKVGVHHFNGNNVDLGT 83
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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