BLASTX 7.6.2
Query= RU04031 /QuerySize=958
(957 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|157345201|emb|CAO71929.1| unnamed protein product [Vitis vini... 199 4e-049
gi|126256295|gb|ABO09801.1| F-box protein [Gossypium hirsutum] 187 2e-045
gi|148615717|gb|ABQ96663.1| F-box protein [Gossypium hirsutum] 181 1e-043
gi|147834525|emb|CAN60914.1| hypothetical protein [Vitis vinifera] 166 3e-039
gi|15233744|ref|NP_194152.1| SLY1 (SLEEPY1) [Arabidopsis thaliana] 162 6e-038
>gi|157345201|emb|CAO71929.1| unnamed protein product [Vitis vinifera]
Length = 179
Score = 199 bits (504), Expect = 4e-049
Identities = 97/152 (63%), Positives = 117/152 (76%), Gaps = 1/152 (0%)
Frame = -2
Query: 815 EEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWELICTRHW 636
EE+ ++ F NLD++L+FEV KHVDARTL A+CVS+QW +TA DERLWE+ICTRHW
Sbjct: 27 EEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERLWEMICTRHW 86
Query: 635 ANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTK-PPSPSSLSSLSSSSSWAAPLKPMVAA 459
AN+GCG QQLRSVVLALGGFRRLH+L +WPL K PPS SS S ++SS + P
Sbjct: 87 ANVGCGTQQLRSVVLALGGFRRLHALCLWPLLKSPPSSSSSPSPYTTSSHSPQSSPFSPP 146
Query: 458 KPHARWGKDEVNLSLSLLSIRFYEKMNYSNRG 363
K RWGKDEV+LSLSLLSIRFYEKM+ ++G
Sbjct: 147 KAPTRWGKDEVHLSLSLLSIRFYEKMSSKSKG 178
>gi|126256295|gb|ABO09801.1| F-box protein [Gossypium hirsutum]
Length = 162
Score = 187 bits (473), Expect = 2e-045
Identities = 91/151 (60%), Positives = 117/151 (77%), Gaps = 10/151 (6%)
Frame = -2
Query: 842 EDKIEQQQQEEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERL 663
+ K+++ +++EE + G NLD+NL++EVFKHVDARTL ASCVS+ W +TA+DERL
Sbjct: 14 DQKLKKIKEDEEPEDTKS-GLMNLDENLLYEVFKHVDARTLARASCVSRLWRQTAKDERL 72
Query: 662 WELICTRHWANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPPSPSSLSSLSSSSSWAA 483
WELICTRHWANIGCG QQLRSVVL LGGFR+LHS Y+W +KP + +S+S+W+
Sbjct: 73 WELICTRHWANIGCGTQQLRSVVLPLGGFRQLHSRYLWTFSKPQA-------ASASAWSP 125
Query: 482 PLKPMVAAKPHARWGKDEVNLSLSLLSIRFY 390
P ++ +KP ARWGKDEVNL LSLLSI+FY
Sbjct: 126 P--KIINSKPPARWGKDEVNLCLSLLSIQFY 154
>gi|148615717|gb|ABQ96663.1| F-box protein [Gossypium hirsutum]
Length = 161
Score = 181 bits (457), Expect = 1e-043
Identities = 93/145 (64%), Positives = 110/145 (75%), Gaps = 10/145 (6%)
Frame = -2
Query: 812 EEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWELICTRHWA 633
+E + + GF NLD+NL++EV KHVDARTL MASCVSK KTA+DERLWELICT HWA
Sbjct: 19 KEDPVPETEGFMNLDENLLYEVLKHVDARTLAMASCVSKLCLKTARDERLWELICTGHWA 78
Query: 632 NIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPPSPSSLSSLSSSSSWAAPLKPMVAAKP 453
NIGCG Q+LR VVL LGGFRRLHS Y+WPL+KP + S L WA P ++ +KP
Sbjct: 79 NIGCGTQKLRYVVLPLGGFRRLHSRYLWPLSKPQAASPL-------PWAPP--KIINSKP 129
Query: 452 HARWGKDEVNLSLSLL-SIRFYEKM 381
ARWGKDEV+L LSLL SI++YEKM
Sbjct: 130 XARWGKDEVHLFLSLLISIQYYEKM 154
>gi|147834525|emb|CAN60914.1| hypothetical protein [Vitis vinifera]
Length = 236
Score = 166 bits (419), Expect = 3e-039
Identities = 83/142 (58%), Positives = 101/142 (71%), Gaps = 6/142 (4%)
Frame = -2
Query: 815 EEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLWELICTRHW 636
EE+ ++ F NLD++L+FEV KHVDARTL A+CVS+QW +TA DERLWE+ICTRHW
Sbjct: 27 EEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERLWEMICTRHW 86
Query: 635 ANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKPPSPSSLS----SLSSSSSWAAPLKPM 468
AN+GCG QQLRSVVLALGGFRRLH+L +WPL + P SS S + SS S ++P P
Sbjct: 87 ANVGCGTQQLRSVVLALGGFRRLHALCLWPLRESPPSSSSSPSPYTTSSHSPQSSPFSPP 146
Query: 467 V--AAKPHARWGKDEVNLSLSL 408
V + K RWGKDE S L
Sbjct: 147 VVPSKKAPTRWGKDEDQTSAPL 168
>gi|15233744|ref|NP_194152.1| SLY1 (SLEEPY1) [Arabidopsis thaliana]
Length = 151
Score = 162 bits (408), Expect = 6e-038
Identities = 74/102 (72%), Positives = 86/102 (84%), Gaps = 6/102 (5%)
Frame = -2
Query: 839 DKIEQQQQEEEVVIVQGPGFTNLDDNLIFEVFKHVDARTLGMASCVSKQWHKTAQDERLW 660
+K + +EEE+ GF+NLD+NL++EV KHVDA+TL M+SCVSK WHKTAQDERLW
Sbjct: 19 NKKMKSTEEEEI------GFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLW 72
Query: 659 ELICTRHWANIGCGNQQLRSVVLALGGFRRLHSLYIWPLTKP 534
ELICTRHW NIGCG QLRSVVLALGGFRRLHSLY+WPL+KP
Sbjct: 73 ELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLWPLSKP 114
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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