BLASTX 7.6.2
Query= RU04167 /QuerySize=597
(596 letters)
Database: GenBank nr;
7,387,702 sequences; 2,551,671,255 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15239337|ref|NP_200854.1| sec61beta family protein [Arabidops... 164 5e-039
gi|147800942|emb|CAN75561.1| hypothetical protein [Vitis vinifera] 154 5e-036
gi|157337474|emb|CAO21820.1| unnamed protein product [Vitis vini... 153 1e-035
gi|116790817|gb|ABK25751.1| unknown [Picea sitchensis] 149 1e-034
gi|108947527|gb|ABG24204.1| putative transport protein [Gymnaden... 144 4e-033
>gi|15239337|ref|NP_200854.1| sec61beta family protein [Arabidopsis thaliana]
Length = 109
Score = 164 bits (414), Expect = 5e-039
Identities = 87/107 (81%), Positives = 96/107 (89%), Gaps = 5/107 (4%)
Frame = +1
Query: 40 ARGSSQSQATSS--STTSRPGVMAPRGSAAATAGMRRRRLGGGGNSSSGSMGGGGGGSGA 213
ARGSSQSQ ++S S+T+RPG+ APRGSAAATAGMRRRRLGGGG SSG GG G GSG+
Sbjct: 2 ARGSSQSQQSTSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSG--GGSGVGSGS 59
Query: 214 GNNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRS 354
+NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVTALHVFGKLYLH+S
Sbjct: 60 -SNMLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKS 105
>gi|147800942|emb|CAN75561.1| hypothetical protein [Vitis vinifera]
Length = 108
Score = 154 bits (388), Expect = 5e-036
Identities = 87/110 (79%), Positives = 92/110 (83%), Gaps = 6/110 (5%)
Frame = +1
Query: 43 RGSSQSQATSSSTTSRPGV--MAPRGSAAATAGMRRRRLGGGGNSSSGSMGGGGGGSGAG 216
RGSSQSQA SSS TSRP MAPRGSAAATAGMRRRRLG G S+ G GG G GS +G
Sbjct: 3 RGSSQSQA-SSSVTSRPSTVGMAPRGSAAATAGMRRRRLGTG--SAGGGSGGFGSGS-SG 58
Query: 217 NNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRSTGGA 366
+NMLRFYTDDAPGLKI+PTVVLVMSLCFIGFVTALHVFGK+Y HRS G A
Sbjct: 59 SNMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRHRSGGVA 108
>gi|157337474|emb|CAO21820.1| unnamed protein product [Vitis vinifera]
Length = 107
Score = 153 bits (384), Expect = 1e-035
Identities = 81/108 (75%), Positives = 90/108 (83%), Gaps = 7/108 (6%)
Frame = +1
Query: 46 GSSQSQATSSSTTSRPGV--MAPRGSAAATAGMRRRRLGGGGNSSSGSMGGGGGGSGAGN 219
GSSQSQA S++ TSRPG MAPRG+AAATAGMRRRR+GGG SS GGGG GS
Sbjct: 4 GSSQSQA-STTATSRPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGS---- 58
Query: 220 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRSTGG 363
NMLRFYTDDAPGLKI+PTVVLVMSLCFIGFVTALHVFGK+Y +++ GG
Sbjct: 59 NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRYKAGGG 106
>gi|116790817|gb|ABK25751.1| unknown [Picea sitchensis]
Length = 108
Score = 149 bits (376), Expect = 1e-034
Identities = 79/107 (73%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
Frame = +1
Query: 40 ARGSSQSQATSSSTTSRPGVMAPRGSAAATAGMRRRRLGGGGNSSSGSMGGGGGGSGAGN 219
ARGSSQSQA S + + P APRGSAAATAG+RRRR G+ GS GGG GGSG G+
Sbjct: 2 ARGSSQSQAASVVSRAGPTGAAPRGSAAATAGLRRRRT-TSGSGGGGSGGGGFGGSGGGS 60
Query: 220 NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRSTG 360
NMLRFYTDDAPGLKI+PTVVLVMSLCFIGFVTALHV GKLY +RS G
Sbjct: 61 NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVIGKLYRYRSGG 107
>gi|108947527|gb|ABG24204.1| putative transport protein [Gymnadenia conopsea]
Length = 107
Score = 144 bits (363), Expect = 4e-033
Identities = 78/108 (72%), Positives = 84/108 (77%), Gaps = 6/108 (5%)
Frame = +1
Query: 43 RGSSQSQATSSS-TTSRPGVMAPRGSAAATAGMRRRRLGG-GGNSSSGSMGGGGGGSGAG 216
RGSSQSQ TSS+ RP PRG+ AA AGMRRRRLGG GG SSG+ GG GS
Sbjct: 3 RGSSQSQTTSSAGGAGRPATAGPRGTPAAAAGMRRRRLGGVGGGGSSGNFSGGASGS--- 59
Query: 217 NNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYLHRSTG 360
NMLRFYTDDAPGLK+SPTVVLVMSLCFIGFVTALHVFGKLY ++S G
Sbjct: 60 -NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYKSGG 106
Database: GenBank nr
Posted date: Wed Dec 03 02:04:20 2008
Number of letters in database: 2,551,671,255
Number of sequences in database: 7,387,702
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0
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