Blast details for RU04171 (GenBank)


BLASTX 7.6.2

Query= RU04171 /QuerySize=728
        (727 letters)

Database: GenBank nr;
          7,387,702 sequences; 2,551,671,255 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|157355648|emb|CAO49465.1| unnamed protein product [Vitis vini...    297   9e-079
gi|89474476|gb|ABD72965.1| GRAS10 [Solanum lycopersicum]               278   4e-073
gi|110644844|gb|ABD72964.1| GRAS9 [Solanum lycopersicum]               254   7e-066
gi|30696193|ref|NP_200064.3| scarecrow-like transcription factor...    149   2e-034
gi|4580523|gb|AAD24408.1|AF036305_1 scarecrow-like 8 [Arabidopsi...    149   2e-034

>gi|157355648|emb|CAO49465.1| unnamed protein product [Vitis vinifera]

          Length = 608

 Score =  297 bits (758), Expect = 9e-079
 Identities = 151/242 (62%), Positives = 189/242 (78%), Gaps = 3/242 (1%)
 Frame = +3

Query:   6 ISEGKSEAAAEILTRLTQVTNPRPNSEQRLLEFMASALKSRVNPVDNPPPVSELFTQEHA 185
           ISEG  +AA E LTRLT V N R NSEQRL  +MASALKSR++  +NPPPV+EL++++H 
Sbjct: 249 ISEGMLDAAMESLTRLTLVANARGNSEQRLAAYMASALKSRLSAAENPPPVAELYSKDHI 308

Query: 186 GSTQVLYELIPCFNLGFIAANLAILEATLADQSTTNKVHVIDFDIGQGGQYRHLLRALSK 365
            +TQ+LY++ PCF LGF+AANLAILE T ++QS   K HV+DFDIGQGGQY +L+ AL  
Sbjct: 309 MATQMLYDMSPCFKLGFMAANLAILETTSSEQSAA-KFHVLDFDIGQGGQYVNLVHALGA 367

Query: 366 RPNGKSSVVKITTV--PDNGGEDRLRSVRQNLSQMAKNLGVGLEFNVVSQKLSELNRESL 539
           R NGK + +KITT+  P NGG D    V ++LSQ+A+ L + L+F VV+ K+ EL+RESL
Sbjct: 368 RQNGKHTSLKITTIADPSNGGTDERLKVGEDLSQLAERLCISLKFKVVTHKIHELSRESL 427

Query: 540 GCEPDEPIAVNFAFKLYSMPDESVSTDNPRDELLRRVKGLAPRVVTLVEQELNTNTAPFM 719
           GCE DE + VN AFKLY MPDESV+T+NPRDELLRRVK L PRVVT+VEQE+N NTAPF+
Sbjct: 428 GCESDEVLVVNLAFKLYKMPDESVTTENPRDELLRRVKSLQPRVVTVVEQEMNANTAPFL 487

Query: 720 AR 725
            R
Sbjct: 488 TR 489

>gi|89474476|gb|ABD72965.1| GRAS10 [Solanum lycopersicum]

          Length = 631

 Score =  278 bits (709), Expect = 4e-073
 Identities = 144/243 (59%), Positives = 190/243 (78%), Gaps = 4/243 (1%)
 Frame = +3

Query:   3 AISEGKSEAAAEILTRLTQVTNPRPNSEQRLLEFMASALKSRVNPVDNPPPVSELFTQEH 182
           AI +GK++ A EILTRL+QV N R +S+QRL  +M +AL+SR+NPVD PPPV EL ++EH
Sbjct: 272 AIYDGKNDVALEILTRLSQVANIRGSSDQRLTAYMVAALRSRLNPVDYPPPVLELQSKEH 331

Query: 183 AGSTQVLYELIPCFNLGFIAANLAILEATLADQSTTNKVHVIDFDIGQGGQYRHLLRALS 362
             +T  LYE+ PCF LGF+AANLAILEA +AD    NK+HVIDFDIGQGGQY HLL AL+
Sbjct: 332 TETTHNLYEVSPCFKLGFMAANLAILEA-VADH-PFNKLHVIDFDIGQGGQYLHLLHALA 389

Query: 363 KRPNGKSSVVKITTVPDNGG--EDRLRSVRQNLSQMAKNLGVGLEFNVVSQKLSELNRES 536
            + +   +V+KIT   +  G  ++RL S+   L+ +A  LGV L FNV+S K+++L+RE+
Sbjct: 390 AKKSNNPAVLKITAFTEQAGGVDERLNSIHMELNSVANRLGVCLYFNVMSCKVADLSREN 449

Query: 537 LGCEPDEPIAVNFAFKLYSMPDESVSTDNPRDELLRRVKGLAPRVVTLVEQELNTNTAPF 716
           LG +PD+ +AVNFAFKLY +PDESV+T+N RDELLRRVK L+P+VVT+VEQ++N NTAPF
Sbjct: 450 LGLDPDDALAVNFAFKLYRLPDESVTTENLRDELLRRVKALSPKVVTVVEQDMNGNTAPF 509

Query: 717 MAR 725
           +AR
Sbjct: 510 LAR 512

>gi|110644844|gb|ABD72964.1| GRAS9 [Solanum lycopersicum]

          Length = 496

 Score =  254 bits (647), Expect = 7e-066
 Identities = 134/243 (55%), Positives = 177/243 (72%), Gaps = 5/243 (2%)
 Frame = +3

Query:   6 ISEGKSEAAAEILTRLTQVTNPRPNSEQRLLEFMASALKSRVNPVDNPPPVSELFTQEHA 185
           I +GK+  A +ILTRL QV + R +SEQRL  +M SAL+SRVN  + PPPV EL ++EHA
Sbjct: 136 IIDGKTNVAVQILTRLAQVADVRGSSEQRLTAYMVSALRSRVNSTEYPPPVMELRSKEHA 195

Query: 186 GSTQVLYELIPCFNLGFIAANLAILEATLADQSTTNKVHVIDFDIGQGGQYRHLLRALSK 365
            S Q LYE+ PCF LGF+AAN AI+EA +AD   +NK+HVIDFDIGQGGQY HLL AL+ 
Sbjct: 196 VSAQNLYEISPCFKLGFMAANFAIVEA-VADH-PSNKIHVIDFDIGQGGQYLHLLHALAS 253

Query: 366 RPNGKSSVVKITTVPDN---GGEDRLRSVRQNLSQMAKNLGVGLEFNVVSQKLSELNRES 536
           +       ++IT +        +  L+S+  +L  +A  +G+ L F V+S+ +++L+R  
Sbjct: 254 KKTDYPISLRITAITTEFTVRADHSLKSIEDDLRSLANKIGISLIFKVISRTITDLSRGK 313

Query: 537 LGCEPDEPIAVNFAFKLYSMPDESVSTDNPRDELLRRVKGLAPRVVTLVEQELNTNTAPF 716
           LG E DE +AVNFA++LY +PDESV+T+N RDELLRRVKGL+P+VVTLVEQELN NTA F
Sbjct: 314 LGIEHDEALAVNFAYRLYRLPDESVTTENLRDELLRRVKGLSPKVVTLVEQELNGNTAAF 373

Query: 717 MAR 725
           +AR
Sbjct: 374 VAR 376

>gi|30696193|ref|NP_200064.3| scarecrow-like transcription factor 8 (SCL8)
        [Arabidopsis thaliana]

          Length = 640

 Score =  149 bits (376), Expect = 2e-034
 Identities = 73/106 (68%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
 Frame = +3

Query: 411 DNGGEDRLRSVRQNLSQMAKNLGVGLEFNVV-SQKLSELNRESLGCEPDEPIAVNFAFKL 587
           D+GGE+RL++V   LSQ+   LG+ + FNVV S +L +LNRESLGC+PDE +AVN AFKL
Sbjct: 419 DDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKL 478

Query: 588 YSMPDESVSTDNPRDELLRRVKGLAPRVVTLVEQELNTNTAPFMAR 725
           Y +PDESV T+NPRDELLRRVKGL PRVVTLVEQE+N+NTAPF+ R
Sbjct: 479 YRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGR 524

>gi|4580523|gb|AAD24408.1|AF036305_1 scarecrow-like 8 [Arabidopsis thaliana]

          Length = 573

 Score =  149 bits (376), Expect = 2e-034
 Identities = 73/106 (68%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
 Frame = +3

Query: 411 DNGGEDRLRSVRQNLSQMAKNLGVGLEFNVV-SQKLSELNRESLGCEPDEPIAVNFAFKL 587
           D+GGE+RL++V   LSQ+   LG+ + FNVV S +L +LNRESLGC+PDE +AVN AFKL
Sbjct: 352 DDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKL 411

Query: 588 YSMPDESVSTDNPRDELLRRVKGLAPRVVTLVEQELNTNTAPFMAR 725
           Y +PDESV T+NPRDELLRRVKGL PRVVTLVEQE+N+NTAPF+ R
Sbjct: 412 YRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGR 457

  Database: GenBank nr
    Posted date:  Wed Dec 03 02:04:20 2008
  Number of letters in database: 2,551,671,255
  Number of sequences in database:  7,387,702

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,122,045,638
Number of Sequences: 7387702
Number of Extensions: 121122045638
Number of Successful Extensions: 65962939
Number of sequences better than 0.0: 0